Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.89□□□□□ -1.95
RHOP08100 AL590135.1-201ENST00000422215 156 ntBASIC2.89□□□□□ -1.95
RHOP08100 AC019205.3-201ENST00000424573 156 ntBASIC2.89□□□□□ -1.95
RHOP08100 EEF1B2P7-201ENST00000451177 676 ntBASIC2.89□□□□□ -1.95
RHOP08100 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
RHOP08100 RN7SKP49-201ENST00000516675 260 ntBASIC2.89□□□□□ -1.95
RHOP08100 SNORA31.16-201ENST00000516773 139 ntBASIC2.89□□□□□ -1.95
RHOP08100 RNA5SP54-201ENST00000516951 92 ntBASIC2.89□□□□□ -1.95
RHOP08100 AC105137.2-201ENST00000569073 466 ntBASIC2.89□□□□□ -1.95
RHOP08100 MIR4659A-201ENST00000580269 81 ntBASIC2.89□□□□□ -1.95
RHOP08100 AC005520.5-201ENST00000613926 164 ntBASIC2.89□□□□□ -1.95
RHOP08100 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RHOP08100 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
RHOP08100 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
RHOP08100 AC092593.1-201ENST00000515413 1815 ntBASIC2.89□□□□□ -1.95
RHOP08100 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RHOP08100 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RHOP08100 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RHOP08100 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RHOP08100 RNU1-35P-201ENST00000362782 153 ntBASIC2.88□□□□□ -1.95
RHOP08100 RNU6-1159P-201ENST00000362933 107 ntBASIC2.88□□□□□ -1.95
RHOP08100 Y_RNA.84-201ENST00000363011 104 ntBASIC2.88□□□□□ -1.95
RHOP08100 SNORD81.1-201ENST00000363064 77 ntBASIC2.88□□□□□ -1.95
RHOP08100 RNU6-879P-201ENST00000364328 108 ntBASIC2.88□□□□□ -1.95
RHOP08100 RNU6-281P-201ENST00000384212 103 ntBASIC2.88□□□□□ -1.95
RHOP08100 RNU6-541P-201ENST00000384709 110 ntBASIC2.88□□□□□ -1.95
RHOP08100 MIR147B-201ENST00000390185 80 ntBASIC2.88□□□□□ -1.95
RHOP08100 RNU6-1140P-201ENST00000410517 106 ntBASIC2.88□□□□□ -1.95
RHOP08100 RNU6-1203P-201ENST00000410703 110 ntBASIC2.88□□□□□ -1.95
RHOP08100 RNU2-25P-201ENST00000411041 191 ntBASIC2.88□□□□□ -1.95
RHOP08100 RPL23AP58-201ENST00000440453 469 ntBASIC2.88□□□□□ -1.95
RHOP08100 snoU13.6-201ENST00000458785 104 ntBASIC2.88□□□□□ -1.95
RHOP08100 RPL39P38-201ENST00000467018 153 ntBASIC2.88□□□□□ -1.95
RHOP08100 AC090525.1-201ENST00000479116 478 ntBASIC2.88□□□□□ -1.95
RHOP08100 RNU6-1023P-201ENST00000516137 106 ntBASIC2.88□□□□□ -1.95
RHOP08100 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.88□□□□□ -1.95
RHOP08100 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.88□□□□□ -1.95
RHOP08100 AP001282.2-201ENST00000616149 309 ntBASIC2.88□□□□□ -1.95
RHOP08100 SNORD98-201ENST00000636377 67 ntBASIC2.88□□□□□ -1.95
RHOP08100 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RHOP08100 AC008264.2-201ENST00000610193 3731 ntBASIC2.88□□□□□ -1.95
RHOP08100 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RHOP08100 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RHOP08100 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RHOP08100 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.87□□□□□ -1.95
RHOP08100 MIR335-201ENST00000362173 94 ntBASIC2.87□□□□□ -1.95
RHOP08100 RNA5SP361-201ENST00000362686 118 ntBASIC2.87□□□□□ -1.95
RHOP08100 snoU2_19.2-201ENST00000363024 80 ntBASIC2.87□□□□□ -1.95
RHOP08100 RNU5F-3P-201ENST00000363767 117 ntBASIC2.87□□□□□ -1.95
RHOP08100 SNORD63-201ENST00000384262 68 ntBASIC2.87□□□□□ -1.95
RHOP08100 MIR487A-201ENST00000385009 80 ntBASIC2.87□□□□□ -1.95
RHOP08100 Y_RNA.581-201ENST00000391017 97 ntBASIC2.87□□□□□ -1.95
RHOP08100 RNU6-1093P-201ENST00000391194 107 ntBASIC2.87□□□□□ -1.95
RHOP08100 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.87□□□□□ -1.95
RHOP08100 OOSP1P1-201ENST00000423265 274 ntBASIC2.87□□□□□ -1.95
RHOP08100 AC096920.1-201ENST00000423991 241 ntBASIC2.87□□□□□ -1.95
RHOP08100 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.87□□□□□ -1.95
RHOP08100 AC007215.1-201ENST00000464893 276 ntBASIC2.87□□□□□ -1.95
RHOP08100 RPS27P26-201ENST00000494583 239 ntBASIC2.87□□□□□ -1.95
RHOP08100 HMGB1P35-201ENST00000503360 598 ntBASIC2.87□□□□□ -1.95
RHOP08100 AIG1P1-201ENST00000503376 148 ntBASIC2.87□□□□□ -1.95
RHOP08100 MTND1P19-201ENST00000511780 315 ntBASIC2.87□□□□□ -1.95
RHOP08100 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.87□□□□□ -1.95
RHOP08100 SNORA31.6-201ENST00000516241 130 ntBASIC2.87□□□□□ -1.95
RHOP08100 Y_RNA.680-201ENST00000516441 93 ntBASIC2.87□□□□□ -1.95
RHOP08100 RNU6-570P-201ENST00000517051 105 ntBASIC2.87□□□□□ -1.95
RHOP08100 AC245166.1-201ENST00000521012 253 ntBASIC2.87□□□□□ -1.95
RHOP08100 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.87□□□□□ -1.95
RHOP08100 CYP4A27P-201ENST00000567218 190 ntBASIC2.87□□□□□ -1.95
RHOP08100 AC005357.1-201ENST00000588399 301 ntBASIC2.87□□□□□ -1.95
RHOP08100 AC008739.2-201ENST00000597006 317 ntBASIC2.87□□□□□ -1.95
RHOP08100 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
RHOP08100 AC005296.1-201ENST00000616145 209 ntBASIC2.87□□□□□ -1.95
RHOP08100 SDR42E1P4-201ENST00000620894 481 ntBASIC2.87□□□□□ -1.95
RHOP08100 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
RHOP08100 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
RHOP08100 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.87□□□□□ -1.95
RHOP08100 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
RHOP08100 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RHOP08100 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RHOP08100 Y_RNA.40-201ENST00000362645 93 ntBASIC2.86□□□□□ -1.95
RHOP08100 Y_RNA.143-201ENST00000363520 106 ntBASIC2.86□□□□□ -1.95
RHOP08100 Y_RNA.257-201ENST00000364596 102 ntBASIC2.86□□□□□ -1.95
RHOP08100 Y_RNA.478-201ENST00000384358 107 ntBASIC2.86□□□□□ -1.95
RHOP08100 MIR329-1-201ENST00000385028 80 ntBASIC2.86□□□□□ -1.95
RHOP08100 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.86□□□□□ -1.95
RHOP08100 SNORD12B-201ENST00000410433 91 ntBASIC2.86□□□□□ -1.95
RHOP08100 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
RHOP08100 RNU6-1001P-201ENST00000411265 100 ntBASIC2.86□□□□□ -1.95
RHOP08100 RNA5SP508-201ENST00000411327 119 ntBASIC2.86□□□□□ -1.95
RHOP08100 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.86□□□□□ -1.95
RHOP08100 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.86□□□□□ -1.95
RHOP08100 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.86□□□□□ -1.95
RHOP08100 RPL26P26-201ENST00000480251 434 ntBASIC2.86□□□□□ -1.95
RHOP08100 AC098869.1-201ENST00000481627 292 ntBASIC2.86□□□□□ -1.95
RHOP08100 RNU5F-2P-201ENST00000516066 82 ntBASIC2.86□□□□□ -1.95
RHOP08100 RN7SKP43-201ENST00000516173 320 ntBASIC2.86□□□□□ -1.95
RHOP08100 RN7SKP282-201ENST00000516824 299 ntBASIC2.86□□□□□ -1.95
RHOP08100 RNU6-388P-201ENST00000517012 105 ntBASIC2.86□□□□□ -1.95
RHOP08100 RNU6-389P-201ENST00000517048 105 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms