Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC108667.1-201ENST00000428618 249 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 USP9YP28-201ENST00000435142 589 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.18□□□□□ -2.22
SEMA3DO95025 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.18□□□□□ -2.22
SEMA3DO95025 TPT1P7-201ENST00000458300 517 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 RNU6-1037P-201ENST00000459571 107 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 AL163540.1-201ENST00000485382 386 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 HMGB1P29-201ENST00000505659 499 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 AC025465.3-201ENST00000510570 311 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 AC025465.4-201ENST00000513422 638 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 RNU6-189P-201ENST00000516120 101 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 SNORA40.12-201ENST00000516329 111 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.18□□□□□ -2.22
SEMA3DO95025 HMGB1P33-201ENST00000563485 527 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 AC092747.3-201ENST00000603769 301 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 CTHRC1P1-201ENST00000605383 469 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 AL121757.2-201ENST00000611223 313 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 AC009509.4-201ENST00000619202 509 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.18□□□□□ -2.22
SEMA3DO95025 MIR3974-201ENST00000637126 96 ntBASIC1.18□□□□□ -2.22
SEMA3DO95025 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SEMA3DO95025 RNU6-227P-201ENST00000362865 103 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 RNU6-1317P-201ENST00000364582 104 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 RNU6-38P-201ENST00000384085 107 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
SEMA3DO95025 DEFB108C-201ENST00000400154 252 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 CDK8P2-201ENST00000415020 547 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.17□□□□□ -2.22
SEMA3DO95025 AC245047.4-201ENST00000433189 144 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 MTCO2P16-201ENST00000436962 677 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 HSPE1P9-201ENST00000440046 311 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AC007395.1-201ENST00000451333 677 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 ATP5J2P3-201ENST00000451550 258 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.17□□□□□ -2.22
SEMA3DO95025 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.17□□□□□ -2.22
SEMA3DO95025 AC079140.3-201ENST00000511111 550 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AC091133.4-201ENST00000511142 308 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 RNA5SP401-201ENST00000515920 127 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 RNU6-1041P-201ENST00000516254 102 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 RNA5SP437-201ENST00000517249 129 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 CENPUP1-201ENST00000526649 1202 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.17□□□□□ -2.22
SEMA3DO95025 AL158211.1-201ENST00000566763 763 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 SNORA77B-201ENST00000578179 125 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AC073413.2-201ENST00000604332 360 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 snoU13.31-201ENST00000607291 104 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AL357078.3-201ENST00000607528 618 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AC103705.1-201ENST00000619013 241 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AL136221.1-201ENST00000621449 509 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AC139792.3-201ENST00000623525 224 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 AC090582.1-201ENST00000636321 199 ntBASIC1.17□□□□□ -2.22
SEMA3DO95025 Y_RNA.132-201ENST00000363421 102 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 RNU6-414P-201ENST00000363705 104 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 RNU6-271P-201ENST00000363858 105 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 RNU4-66P-201ENST00000365199 138 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 RNU4-20P-201ENST00000365601 151 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 SNORA29-201ENST00000384183 140 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 MIR548B-201ENST00000385247 97 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 RPL37P10-201ENST00000412884 288 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 UBE2V1P8-201ENST00000437166 265 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AL603825.1-201ENST00000438481 80 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.16□□□□□ -2.22
SEMA3DO95025 HMGN2P9-201ENST00000476875 229 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AC108729.3-201ENST00000513484 108 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 RNU6-1069P-201ENST00000516612 133 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AC087854.1-201ENST00000519706 414 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.16□□□□□ -2.22
SEMA3DO95025 MRPS36P4-201ENST00000534436 298 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AP003034.1-201ENST00000534621 422 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AC084364.2-201ENST00000546924 395 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.16□□□□□ -2.22
SEMA3DO95025 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.16□□□□□ -2.22
SEMA3DO95025 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.16□□□□□ -2.22
SEMA3DO95025 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.16□□□□□ -2.22
SEMA3DO95025 MIR4498-201ENST00000577599 66 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 MIR5692C1-201ENST00000585309 91 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AC016727.2-201ENST00000603988 621 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.16□□□□□ -2.22
SEMA3DO95025 AC095038.3-201ENST00000634439 195 ntBASIC1.16□□□□□ -2.22
SEMA3DO95025 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SEMA3DO95025 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SEMA3DO95025 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
SEMA3DO95025 Y_RNA.77-201ENST00000362962 107 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 Y_RNA.140-201ENST00000363474 103 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 RNU1-96P-201ENST00000364163 162 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 RNU6-1329P-201ENST00000365664 107 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 MIR520A-201ENST00000384862 85 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 Y_RNA.582-201ENST00000391023 95 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AF228730.1-201ENST00000397972 663 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 MIR1267-201ENST00000408723 78 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AP1B1P2-201ENST00000416196 106 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 AC060773.1-201ENST00000421698 310 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 C8orf59P1-201ENST00000429930 303 ntBASIC1.15□□□□□ -2.23
SEMA3DO95025 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 1350.3 ms