Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.07□□□□□ -1.92
CDKL5O76039 UBL5P4-201ENST00000562584 236 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 MIR3609-201ENST00000582661 80 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 AL356157.2-201ENST00000605122 111 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 AC002064.3-201ENST00000623448 346 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 AL450472.1-202ENST00000637286 180 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDKL5O76039 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.07□□□□□ -1.92
CDKL5O76039 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.07□□□□□ -1.92
CDKL5O76039 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDKL5O76039 AC138915.1-201ENST00000565427 1685 ntBASIC3.07□□□□□ -1.92
CDKL5O76039 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDKL5O76039 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CDKL5O76039 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
CDKL5O76039 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDKL5O76039 SNORD81.1-201ENST00000363064 77 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 SNORD113-8-201ENST00000363497 74 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 RNU6-1141P-201ENST00000364520 107 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 Y_RNA.319-201ENST00000365138 92 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 RNU6-142P-201ENST00000384019 107 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 MIR10B-201ENST00000385011 110 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 AL603910.2-201ENST00000407268 136 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 RNU2-14P-201ENST00000411053 191 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 AL590135.1-201ENST00000422215 156 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.06□□□□□ -1.92
CDKL5O76039 AC096638.1-201ENST00000444678 216 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 AL139109.1-201ENST00000455491 297 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 snoU13.6-201ENST00000458785 104 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 snoU13.28-201ENST00000459235 104 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.06□□□□□ -1.92
CDKL5O76039 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.06□□□□□ -1.92
CDKL5O76039 AC016256.1-201ENST00000547971 354 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 RPL12P50-201ENST00000603116 116 ntBASIC3.06□□□□□ -1.92
CDKL5O76039 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CDKL5O76039 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.05□□□□□ -1.92
CDKL5O76039 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDKL5O76039 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDKL5O76039 RNU6-859P-201ENST00000362728 107 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 RNU6-209P-201ENST00000384118 107 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 SNORA1.3-201ENST00000384676 136 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 RNU6-541P-201ENST00000384709 110 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 SNORD12B-201ENST00000410433 91 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 RN7SKP61-201ENST00000410642 295 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 WARS2P1-201ENST00000429678 537 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 AP000705.1-201ENST00000454567 350 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.05□□□□□ -1.92
CDKL5O76039 RPL30P12-201ENST00000474666 353 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 AC016632.1-201ENST00000503994 196 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 SNORA31.6-201ENST00000516241 130 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 RNA5SP282-201ENST00000516355 108 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 CKS1BP7-201ENST00000522230 235 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.05□□□□□ -1.92
CDKL5O76039 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.05□□□□□ -1.92
CDKL5O76039 MIR5695-201ENST00000579717 85 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 MIR3529-201ENST00000637713 78 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDKL5O76039 RBBP8P1-201ENST00000449447 1844 ntBASIC3.05□□□□□ -1.92
CDKL5O76039 AC091564.4-201ENST00000533934 2194 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDKL5O76039 Y_RNA.54-201ENST00000362766 105 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 RNU6-200P-201ENST00000364743 107 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 RNU6-622P-201ENST00000384272 103 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 RNU6-1140P-201ENST00000410517 106 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 RNU6-1001P-201ENST00000411265 100 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 RPS23P5-201ENST00000495419 428 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 AC096725.1-201ENST00000514266 313 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 RNU6-496P-201ENST00000516145 99 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 SNORA31.15-201ENST00000516771 132 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 SCARNA24.2-201ENST00000516968 130 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.04□□□□□ -1.92
CDKL5O76039 AC004486.1-201ENST00000546846 233 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 AC090897.2-201ENST00000581715 130 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 MIR5092-201ENST00000583139 88 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 FO624990.1-201ENST00000636373 85 ntBASIC3.04□□□□□ -1.92
CDKL5O76039 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.04□□□□□ -1.92
CDKL5O76039 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CDKL5O76039 Y_RNA.277-201ENST00000364754 102 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 Y_RNA.352-201ENST00000365439 102 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CDKL5O76039 RNA5SP210-201ENST00000391034 120 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 AC023141.4-201ENST00000412031 328 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 COTL1P1-201ENST00000422309 375 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 MTND5P15-201ENST00000434246 349 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 AC244670.1-201ENST00000436879 112 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 AC005002.2-201ENST00000438228 269 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 RPL39P29-201ENST00000447779 157 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 HSPE1P25-201ENST00000455484 251 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 RNU5F-8P-201ENST00000515941 111 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 GTF3AP2-201ENST00000557014 266 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 AC009779.6-201ENST00000603972 165 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 AC005296.1-201ENST00000616145 209 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 MIR6076-201ENST00000617521 113 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.03□□□□□ -1.92
CDKL5O76039 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.03□□□□□ -1.92
CDKL5O76039 HAUS6P2-201ENST00000433254 2404 ntBASIC3.03□□□□□ -1.92
CDKL5O76039 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.03□□□□□ -1.93
CDKL5O76039 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.02□□□□□ -1.93
CDKL5O76039 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms