Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 SNORD116-2-201ENST00000384274 95 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 RNU6-296P-201ENST00000384608 107 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 SNORD116-6-201ENST00000384711 96 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 MTCO3P40-201ENST00000392516 676 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 MTCO1P21-201ENST00000416634 589 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 AL513185.2-201ENST00000425543 193 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 USP9YP28-201ENST00000435142 589 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 AL603825.1-201ENST00000438481 80 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK3AO75631 JTBP1-201ENST00000441314 247 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 MTND3P16-201ENST00000452205 344 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.35□□□□□ -2.19
UPK3AO75631 AMD1P1-201ENST00000457220 922 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 AC016925.1-201ENST00000458303 298 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 RNU6-1208P-201ENST00000459588 107 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK3AO75631 RNA5SP481-201ENST00000516814 122 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 RNU6-835P-201ENST00000516974 104 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.35□□□□□ -2.19
UPK3AO75631 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.35□□□□□ -2.19
UPK3AO75631 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 AP000942.3-201ENST00000603702 160 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 AC016727.1-205ENST00000605437 569 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UPK3AO75631 Z99129.1-201ENST00000612510 255 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
UPK3AO75631 MTND5P10-201ENST00000603719 1809 ntBASIC1.35□□□□□ -2.19
UPK3AO75631 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UPK3AO75631 SNORD33-201ENST00000362761 85 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 Y_RNA.132-201ENST00000363421 102 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 RNU6-457P-201ENST00000363999 107 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 SNORA29-201ENST00000384183 140 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 SNORA17.3-201ENST00000391159 129 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 MIR1304-201ENST00000408243 91 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 AL359672.1-201ENST00000442302 409 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 AC010531.2-201ENST00000465012 153 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.34□□□□□ -2.19
UPK3AO75631 RPL26P26-201ENST00000480251 434 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 AC091435.1-201ENST00000505442 584 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 AC091885.1-201ENST00000506658 268 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 RNU6-1332P-201ENST00000516666 104 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 DEFB131C-201ENST00000528817 165 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.34□□□□□ -2.19
UPK3AO75631 AL157687.1-201ENST00000554853 619 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 AC015720.1-201ENST00000565251 277 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 SNORA59B-202ENST00000578183 701 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 MIR4303-201ENST00000581299 66 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 AC073534.2-201ENST00000620377 381 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 MIR8063-201ENST00000621930 81 ntBASIC1.34□□□□□ -2.19
UPK3AO75631 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UPK3AO75631 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
UPK3AO75631 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.33□□□□□ -2.2
UPK3AO75631 ICE2P2-201ENST00000483823 2787 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UPK3AO75631 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
UPK3AO75631 RNU6-545P-201ENST00000362681 104 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 RNU6-214P-201ENST00000384130 107 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 CALM2P3-201ENST00000400429 449 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 RNU6-648P-201ENST00000410190 107 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 RNA5SP494-201ENST00000410653 129 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 ARL5AP1-201ENST00000418991 388 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK3AO75631 HSPE1P9-201ENST00000440046 311 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AC069257.2-201ENST00000441819 155 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK3AO75631 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK3AO75631 AC107401.1-201ENST00000503426 685 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AC092436.3-201ENST00000511788 257 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AC108729.3-201ENST00000513484 108 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK3AO75631 AC016256.1-201ENST00000547971 354 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 SCOCP1-201ENST00000554676 349 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AL512360.1-201ENST00000555346 234 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AC245008.1-201ENST00000608123 476 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AL359880.1-201ENST00000621879 266 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AC124864.2-201ENST00000624736 186 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 AC010615.1-201ENST00000594254 1764 ntBASIC1.33□□□□□ -2.2
UPK3AO75631 RNU6-271P-201ENST00000363858 105 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 RNU6-1019P-201ENST00000364424 107 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 Y_RNA.338-201ENST00000365320 114 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 RNU6-877P-201ENST00000383868 107 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 MIR521-1-201ENST00000384902 87 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 EIF4E2P1-201ENST00000393781 255 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 RNU6-1068P-201ENST00000410958 103 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 RNU6-325P-201ENST00000411132 105 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms