Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.21□□□□□ -2.06
GPC4O75487 AL669831.3-213ENST00000636676 183 ntBASIC2.21□□□□□ -2.06
GPC4O75487 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
GPC4O75487 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.21□□□□□ -2.06
GPC4O75487 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
GPC4O75487 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
GPC4O75487 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
GPC4O75487 RNU6-1188P-201ENST00000363795 107 ntBASIC2.2□□□□□ -2.06
GPC4O75487 Y_RNA.405-201ENST00000383979 100 ntBASIC2.2□□□□□ -2.06
GPC4O75487 Y_RNA.451-201ENST00000384200 100 ntBASIC2.2□□□□□ -2.06
GPC4O75487 Y_RNA.524-201ENST00000384564 100 ntBASIC2.2□□□□□ -2.06
GPC4O75487 Y_RNA.561-201ENST00000384694 100 ntBASIC2.2□□□□□ -2.06
GPC4O75487 RNU6-1009P-201ENST00000390996 107 ntBASIC2.2□□□□□ -2.06
GPC4O75487 SNORA12.2-201ENST00000391040 156 ntBASIC2.2□□□□□ -2.06
GPC4O75487 U3.40-201ENST00000408706 208 ntBASIC2.2□□□□□ -2.06
GPC4O75487 AC004866.1-201ENST00000411748 78 ntBASIC2.2□□□□□ -2.06
GPC4O75487 NCOR1P3-201ENST00000420479 303 ntBASIC2.2□□□□□ -2.06
GPC4O75487 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.2□□□□□ -2.06
GPC4O75487 AL137159.1-201ENST00000452808 512 ntBASIC2.2□□□□□ -2.06
GPC4O75487 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.2□□□□□ -2.06
GPC4O75487 AC007215.1-201ENST00000464893 276 ntBASIC2.2□□□□□ -2.06
GPC4O75487 TOMM22P6-201ENST00000465035 409 ntBASIC2.2□□□□□ -2.06
GPC4O75487 SCARNA16.2-201ENST00000516520 172 ntBASIC2.2□□□□□ -2.06
GPC4O75487 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.2□□□□□ -2.06
GPC4O75487 FRG2DP-202ENST00000566967 323 ntBASIC2.2□□□□□ -2.06
GPC4O75487 SNRPGP17-201ENST00000603780 214 ntBASIC2.2□□□□□ -2.06
GPC4O75487 AC025754.2-201ENST00000606491 432 ntBASIC2.2□□□□□ -2.06
GPC4O75487 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.2□□□□□ -2.06
GPC4O75487 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.2□□□□□ -2.06
GPC4O75487 PISRT1.1-201ENST00000616930 107 ntBASIC2.2□□□□□ -2.06
GPC4O75487 AL590808.1-201ENST00000618696 141 ntBASIC2.2□□□□□ -2.06
GPC4O75487 AC009831.4-201ENST00000620744 325 ntBASIC2.2□□□□□ -2.06
GPC4O75487 MIR1302-1-201ENST00000637932 143 ntBASIC2.2□□□□□ -2.06
GPC4O75487 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
GPC4O75487 MTND5P6-201ENST00000422338 1798 ntBASIC2.2□□□□□ -2.06
GPC4O75487 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
GPC4O75487 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
GPC4O75487 Y_RNA.263-201ENST00000364659 114 ntBASIC2.19□□□□□ -2.06
GPC4O75487 Y_RNA.356-201ENST00000365475 113 ntBASIC2.19□□□□□ -2.06
GPC4O75487 MIR221-201ENST00000385135 110 ntBASIC2.19□□□□□ -2.06
GPC4O75487 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
GPC4O75487 Y_RNA.646-201ENST00000410980 101 ntBASIC2.19□□□□□ -2.06
GPC4O75487 USMG5P1-201ENST00000425964 177 ntBASIC2.19□□□□□ -2.06
GPC4O75487 AL445305.1-201ENST00000432577 575 ntBASIC2.19□□□□□ -2.06
GPC4O75487 AL353997.1-201ENST00000432936 108 ntBASIC2.19□□□□□ -2.06
GPC4O75487 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.19□□□□□ -2.06
GPC4O75487 MTCO3P8-201ENST00000453691 755 ntBASIC2.19□□□□□ -2.06
GPC4O75487 AC132942.1-201ENST00000486753 483 ntBASIC2.19□□□□□ -2.06
GPC4O75487 RNU6-559P-201ENST00000516151 98 ntBASIC2.19□□□□□ -2.06
GPC4O75487 RNU2-44P-201ENST00000516795 194 ntBASIC2.19□□□□□ -2.06
GPC4O75487 AL590705.4-201ENST00000532209 134 ntBASIC2.19□□□□□ -2.06
GPC4O75487 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.19□□□□□ -2.06
GPC4O75487 SNRPGP18-201ENST00000553000 214 ntBASIC2.19□□□□□ -2.06
GPC4O75487 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.19□□□□□ -2.06
GPC4O75487 MTND4LP32-201ENST00000636111 270 ntBASIC2.19□□□□□ -2.06
GPC4O75487 AC112487.2-201ENST00000637950 304 ntBASIC2.19□□□□□ -2.06
GPC4O75487 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
GPC4O75487 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
GPC4O75487 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
GPC4O75487 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.19□□□□□ -2.06
GPC4O75487 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
GPC4O75487 RNU1-76P-201ENST00000362903 159 ntBASIC2.18□□□□□ -2.06
GPC4O75487 SNORD115-3-201ENST00000363100 82 ntBASIC2.18□□□□□ -2.06
GPC4O75487 SNORD115-32-201ENST00000364079 82 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNU6-17P-201ENST00000384245 107 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNU6-18P-201ENST00000384527 107 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNU6-310P-201ENST00000384655 107 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNA5SP270-201ENST00000411361 118 ntBASIC2.18□□□□□ -2.06
GPC4O75487 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
GPC4O75487 AC004386.2-201ENST00000441858 148 ntBASIC2.18□□□□□ -2.06
GPC4O75487 AC093019.1-201ENST00000443135 252 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNU7-14P-201ENST00000459331 62 ntBASIC2.18□□□□□ -2.06
GPC4O75487 FGF7P4-201ENST00000509595 295 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNU5F-4P-201ENST00000516581 114 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNA5SP490-201ENST00000517141 136 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RNU6-58P-201ENST00000517143 103 ntBASIC2.18□□□□□ -2.06
GPC4O75487 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
GPC4O75487 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.18□□□□□ -2.06
GPC4O75487 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.18□□□□□ -2.06
GPC4O75487 AC027288.2-201ENST00000553028 243 ntBASIC2.18□□□□□ -2.06
GPC4O75487 AL355375.2-201ENST00000574825 175 ntBASIC2.18□□□□□ -2.06
GPC4O75487 MIR5701-3-201ENST00000578890 82 ntBASIC2.18□□□□□ -2.06
GPC4O75487 MIR5701-1-201ENST00000585138 82 ntBASIC2.18□□□□□ -2.06
GPC4O75487 AL355802.3-201ENST00000607571 545 ntBASIC2.18□□□□□ -2.06
GPC4O75487 RMST_6.1-201ENST00000611980 203 ntBASIC2.18□□□□□ -2.06
GPC4O75487 AC025253.1-201ENST00000613623 543 ntBASIC2.18□□□□□ -2.06
GPC4O75487 MIR5701-2-201ENST00000615634 82 ntBASIC2.18□□□□□ -2.06
GPC4O75487 AL359314.1-201ENST00000616913 261 ntBASIC2.18□□□□□ -2.06
GPC4O75487 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.18□□□□□ -2.06
GPC4O75487 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.18□□□□□ -2.06
GPC4O75487 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
GPC4O75487 ZNF204P-201ENST00000416749 2397 ntBASIC2.17□□□□□ -2.06
GPC4O75487 SNORD116-29-201ENST00000384516 83 ntBASIC2.17□□□□□ -2.06
GPC4O75487 HMGN2P39-201ENST00000398005 273 ntBASIC2.17□□□□□ -2.06
GPC4O75487 SRIP3-201ENST00000413200 219 ntBASIC2.17□□□□□ -2.06
GPC4O75487 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.17□□□□□ -2.06
GPC4O75487 MTCO3P10-201ENST00000455912 772 ntBASIC2.17□□□□□ -2.06
GPC4O75487 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms