Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 SNORD46.1-201ENST00000364139 104 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 RNU2-64P-201ENST00000411315 191 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 AC004866.1-201ENST00000411748 78 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF40AO75400 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.82□□□□□ -1.8
PRPF40AO75400 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF40AO75400 RNU6-155P-201ENST00000516347 100 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 AC006380.1-201ENST00000603598 186 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 RPL17P51-201ENST00000605218 238 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF40AO75400 SNORA50A-202ENST00000629536 136 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 AC068205.3-201ENST00000636385 468 ntBASIC3.82□□□□□ -1.8
PRPF40AO75400 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF40AO75400 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PRPF40AO75400 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF40AO75400 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.82□□□□□ -1.8
PRPF40AO75400 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRPF40AO75400 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF40AO75400 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRPF40AO75400 MIR208A-201ENST00000362287 71 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 RNU1-70P-201ENST00000362618 164 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 Y_RNA.101-201ENST00000363154 102 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 RNY1-201ENST00000364228 113 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 Y_RNA.446-201ENST00000384178 104 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 RPL19P1-201ENST00000411635 428 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 RPL32P35-201ENST00000415214 394 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF40AO75400 CYCSP35-201ENST00000451978 304 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 snoU13.22-201ENST00000459428 104 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 RPL27AP5-201ENST00000469428 449 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 Y_RNA.700-201ENST00000516806 100 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF40AO75400 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.81□□□□□ -1.8
PRPF40AO75400 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.81□□□□□ -1.8
PRPF40AO75400 AC130289.1-201ENST00000577321 73 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 AL162424.1-201ENST00000602325 221 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PRPF40AO75400 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PRPF40AO75400 AL049781.1-201ENST00000623195 3585 ntBASIC3.81□□□□□ -1.8
PRPF40AO75400 AC093831.2-201ENST00000624393 3427 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF40AO75400 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF40AO75400 Y_RNA.136-201ENST00000363444 102 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 Y_RNA.200-201ENST00000364018 102 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 SNORD87-201ENST00000364849 89 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF40AO75400 MIR183-201ENST00000384958 110 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 RN7SKP111-201ENST00000410349 271 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 Y_RNA.597-201ENST00000410463 100 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 RNU2-14P-201ENST00000411053 191 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF40AO75400 RBMY2UP-201ENST00000453474 324 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 AC091959.1-201ENST00000495857 238 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 SEM1P1-201ENST00000506694 209 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 RNU6-182P-201ENST00000516970 105 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF40AO75400 AL512605.2-201ENST00000592972 256 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 AL109918.3-201ENST00000603072 338 ntBASIC3.8□□□□□ -1.8
PRPF40AO75400 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PRPF40AO75400 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.8□□□□□ -1.8
PRPF40AO75400 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF40AO75400 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF40AO75400 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF40AO75400 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF40AO75400 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF40AO75400 Y_RNA.297-201ENST00000364950 91 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 SNORA70.4-201ENST00000365509 134 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 MIR1298-201ENST00000408783 112 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 RNU2-54P-201ENST00000410299 190 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 MTCO1P5-201ENST00000433573 344 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF40AO75400 NDUFB4P10-201ENST00000452541 359 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 RPS29P12-201ENST00000460178 152 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 RN7SL75P-201ENST00000461926 281 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF40AO75400 AC025518.1-201ENST00000479856 347 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 Y_RNA.679-201ENST00000516416 91 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 MIR4643-201ENST00000577473 78 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 U6.105-201ENST00000637379 88 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 MIR7515-201ENST00000637837 67 ntBASIC3.79□□□□□ -1.8
PRPF40AO75400 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PRPF40AO75400 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF40AO75400 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.78□□□□□ -1.8
PRPF40AO75400 RNA5SP50-201ENST00000363731 107 ntBASIC3.78□□□□□ -1.8
PRPF40AO75400 RNU6-740P-201ENST00000364734 105 ntBASIC3.78□□□□□ -1.8
PRPF40AO75400 Y_RNA.418-201ENST00000384029 102 ntBASIC3.78□□□□□ -1.8
PRPF40AO75400 SNORA48.8-201ENST00000391324 134 ntBASIC3.78□□□□□ -1.8
PRPF40AO75400 Y_RNA.590-201ENST00000410140 107 ntBASIC3.78□□□□□ -1.8
PRPF40AO75400 RNU5F-4P-201ENST00000516581 114 ntBASIC3.78□□□□□ -1.8
PRPF40AO75400 IGKV2-26-201ENST00000518305 343 ntBASIC3.78□□□□□ -1.8
PRPF40AO75400 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.78□□□□□ -1.8
PRPF40AO75400 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.78□□□□□ -1.81
PRPF40AO75400 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF40AO75400 RNA5SP387-201ENST00000364226 106 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 SNORD32B-201ENST00000364460 84 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 Y_RNA.275-201ENST00000364726 110 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 Y_RNA.785-201ENST00000384290 109 ntBASIC3.77□□□□□ -1.81
PRPF40AO75400 SNORD17-201ENST00000390930 237 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms