Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AL135790.2-201ENST00000437701 267 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 RNA5SP310-201ENST00000459084 116 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM13O60858 SCARNA8-201ENST00000515924 131 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 HSPE1P4-201ENST00000550617 308 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 LINC00933-203ENST00000559812 219 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM13O60858 MIR3186-201ENST00000577404 85 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 MIR3646-201ENST00000578301 84 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 AC083809.1-201ENST00000615051 472 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 AC073476.4-201ENST00000628409 72 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM13O60858 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.36□□□□□ -1.87
TRIM13O60858 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
TRIM13O60858 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM13O60858 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM13O60858 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RNU6-1141P-201ENST00000364520 107 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RNU6-407P-201ENST00000365280 104 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 SNORA1.3-201ENST00000384676 136 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 AL512633.1-201ENST00000399931 655 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RN7SKP61-201ENST00000410642 295 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM13O60858 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM13O60858 AC091179.3-201ENST00000474761 144 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RNU5E-3P-201ENST00000515913 68 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RNU6-436P-201ENST00000516171 114 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RNU6-168P-201ENST00000516189 101 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RNU6-453P-201ENST00000516819 85 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RNU2-56P-201ENST00000516826 190 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 RNU2-12P-201ENST00000517216 168 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 AC136628.3-201ENST00000521868 290 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM13O60858 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.35□□□□□ -1.87
TRIM13O60858 AL391813.1-201ENST00000603098 260 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
TRIM13O60858 MIR3674-201ENST00000636576 68 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 AC093010.3-201ENST00000570269 15214 ntBASIC3.35□□□□□ -1.87
TRIM13O60858 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM13O60858 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRIM13O60858 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM13O60858 SNORD56.1-201ENST00000362913 68 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 RNU6-1285P-201ENST00000363480 105 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 SNORD56.3-201ENST00000363507 71 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 RNU6-884P-201ENST00000363889 107 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 RNU6-643P-201ENST00000384018 107 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 RNU6-793P-201ENST00000384233 104 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 U8.11-201ENST00000384699 133 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 U8.12-201ENST00000384701 133 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 Y_RNA.572-201ENST00000384757 98 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 MIR616-201ENST00000385293 97 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 AP000567.1-201ENST00000406413 156 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 NDUFS5P4-201ENST00000412983 318 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 AL158823.1-201ENST00000418441 478 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 BPY2DP-201ENST00000422208 265 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM13O60858 RPS29P7-201ENST00000439662 171 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 SNORD105B-201ENST00000458770 79 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 U8.18-201ENST00000459285 133 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM13O60858 RNU6-1007P-201ENST00000516586 107 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 NACAP3-201ENST00000552100 481 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 MTND5P34-201ENST00000568888 325 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM13O60858 AC012468.1-201ENST00000604888 430 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 AC019159.1-201ENST00000605094 187 ntBASIC3.34□□□□□ -1.87
TRIM13O60858 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM13O60858 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM13O60858 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
TRIM13O60858 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TRIM13O60858 AC002546.1-201ENST00000588041 2504 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRIM13O60858 Y_RNA.251-201ENST00000364551 99 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 RNU6-1180P-201ENST00000364935 107 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 AC068538.1-201ENST00000376856 336 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 U3.40-201ENST00000408706 208 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM13O60858 AC146507.2-201ENST00000460608 476 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 SNRPGP7-201ENST00000469016 106 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 AC006445.2-201ENST00000510061 472 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 AC093331.1-201ENST00000521474 169 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 HIGD1AP1-201ENST00000550979 275 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.33□□□□□ -1.88
TRIM13O60858 AC021231.3-201ENST00000558497 370 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 AC007224.1-201ENST00000564410 144 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 AC020895.1-201ENST00000595362 272 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 AL391903.3-201ENST00000612158 163 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 MIR3914-2-201ENST00000637339 95 ntBASIC3.33□□□□□ -1.88
TRIM13O60858 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM13O60858 AC010329.5-201ENST00000623497 2174 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 AC092268.1-201ENST00000342691 405 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 RNY1P11-201ENST00000363759 113 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 RNU6-1048P-201ENST00000364054 107 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 Y_RNA.287-201ENST00000364853 94 ntBASIC3.32□□□□□ -1.88
TRIM13O60858 Y_RNA.293-201ENST00000364908 93 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 219.7 ms