Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.26□□□□□ -1.73
GFRA3O60609 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.26□□□□□ -1.73
GFRA3O60609 AC140658.3-201ENST00000567603 271 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 FAM27D1-201ENST00000612308 341 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 RN7SL853P-201ENST00000617250 223 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 MIR7975-201ENST00000619350 68 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 AC064859.1-201ENST00000624741 174 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 MIR3651-201ENST00000630427 90 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.26□□□□□ -1.73
GFRA3O60609 AC004817.4-201ENST00000602396 3625 ntBASIC4.26□□□□□ -1.73
GFRA3O60609 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
GFRA3O60609 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA3O60609 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
GFRA3O60609 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.26□□□□□ -1.73
GFRA3O60609 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA3O60609 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA3O60609 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA3O60609 RNU4-15P-201ENST00000362613 141 ntBASIC4.25□□□□□ -1.73
GFRA3O60609 UBBP2-201ENST00000376781 231 ntBASIC4.25□□□□□ -1.73
GFRA3O60609 MIR586-201ENST00000385035 97 ntBASIC4.25□□□□□ -1.73
GFRA3O60609 SNORA40.18-201ENST00000391200 128 ntBASIC4.25□□□□□ -1.73
GFRA3O60609 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.25□□□□□ -1.73
GFRA3O60609 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.25□□□□□ -1.73
GFRA3O60609 Y_RNA.609-201ENST00000410669 89 ntBASIC4.25□□□□□ -1.73
GFRA3O60609 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC4.25□□□□□ -1.73
GFRA3O60609 AC104984.5-201ENST00000586878 94 ntBASIC4.25□□□□□ -1.73
GFRA3O60609 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA3O60609 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
GFRA3O60609 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
GFRA3O60609 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.25□□□□□ -1.73
GFRA3O60609 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.25□□□□□ -1.73
GFRA3O60609 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
GFRA3O60609 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA3O60609 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GFRA3O60609 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.24□□□□□ -1.73
GFRA3O60609 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA3O60609 AC058791.1-201ENST00000608412 3198 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA3O60609 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA3O60609 SNORA2.2-201ENST00000365473 135 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 MIR518F-201ENST00000384973 87 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 RNU1-131P-201ENST00000458943 161 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 AL592156.1-201ENST00000508758 304 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 RN7SKP282-201ENST00000516824 299 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 HSPE1P18-201ENST00000517602 280 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 AC107934.2-201ENST00000518653 310 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 AC068657.1-201ENST00000520807 306 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GFRA3O60609 MIR3134-201ENST00000579433 74 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 MIR3683-201ENST00000580847 82 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 SNORD84-203ENST00000584275 78 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 RPS15AP11-201ENST00000594193 385 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 RNU6-91P-201ENST00000607774 107 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 FTX_3.1-201ENST00000610451 147 ntBASIC4.24□□□□□ -1.73
GFRA3O60609 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
GFRA3O60609 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.24□□□□□ -1.73
GFRA3O60609 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
GFRA3O60609 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.24□□□□□ -1.73
GFRA3O60609 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.23□□□□□ -1.73
GFRA3O60609 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA3O60609 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.23□□□□□ -1.73
GFRA3O60609 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA3O60609 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA3O60609 RNU6-743P-201ENST00000364151 106 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 RNU2-49P-201ENST00000410666 184 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.23□□□□□ -1.73
GFRA3O60609 RPS4XP11-201ENST00000446897 772 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 BX510359.1-201ENST00000456973 237 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 RPS26P28-201ENST00000470806 348 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 RN7SL293P-201ENST00000481765 281 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 RN7SL812P-201ENST00000493791 279 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 RNA5SP497-201ENST00000516081 97 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 RNU6-581P-201ENST00000516214 105 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.23□□□□□ -1.73
GFRA3O60609 AC011602.1-201ENST00000546484 331 ntBASIC4.23□□□□□ -1.73
GFRA3O60609 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.23□□□□□ -1.73
GFRA3O60609 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA3O60609 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GFRA3O60609 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GFRA3O60609 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
GFRA3O60609 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
GFRA3O60609 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
GFRA3O60609 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.22□□□□□ -1.73
GFRA3O60609 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.22□□□□□ -1.73
GFRA3O60609 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
GFRA3O60609 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
GFRA3O60609 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA3O60609 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.22□□□□□ -1.73
GFRA3O60609 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
GFRA3O60609 AC008079.2-201ENST00000623543 20396 ntBASIC4.22□□□□□ -1.73
GFRA3O60609 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA3O60609 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA3O60609 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA3O60609 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GFRA3O60609 SNORA70E-201ENST00000384492 135 ntBASIC4.22□□□□□ -1.73
GFRA3O60609 MIR128-1-201ENST00000384921 82 ntBASIC4.22□□□□□ -1.73
GFRA3O60609 AC104333.2-201ENST00000422630 192 ntBASIC4.22□□□□□ -1.73
GFRA3O60609 FTLP19-201ENST00000433300 394 ntBASIC4.22□□□□□ -1.73
GFRA3O60609 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.22□□□□□ -1.73
GFRA3O60609 AC140113.4-201ENST00000622087 222 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms