Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC006362.1-201ENST00000567392 174 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AC090517.1-201ENST00000569307 266 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 MIR3923-201ENST00000579521 83 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 MIR3136-201ENST00000583498 78 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AC087752.4-201ENST00000605911 462 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AC007684.1-201ENST00000609671 477 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 AL121757.2-201ENST00000611223 313 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 Z69908.1-201ENST00000622603 247 ntBASIC1.2□□□□□ -2.22
CHMP2AO43633 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
CHMP2AO43633 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
CHMP2AO43633 RNU6-862P-201ENST00000362804 105 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 Y_RNA.238-201ENST00000364441 102 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 RNU6-438P-201ENST00000365561 103 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 Y_RNA.378-201ENST00000365652 113 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 RNU6-418P-201ENST00000384035 107 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 RNU5A-2P-201ENST00000384337 116 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 RNU6-517P-201ENST00000384362 110 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 MIR520A-201ENST00000384862 85 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 RNU6-360P-201ENST00000390944 104 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.19□□□□□ -2.22
CHMP2AO43633 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.19□□□□□ -2.22
CHMP2AO43633 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.19□□□□□ -2.22
CHMP2AO43633 OR2AQ1P-201ENST00000451972 200 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.19□□□□□ -2.22
CHMP2AO43633 MRPS36P4-201ENST00000534436 298 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.19□□□□□ -2.22
CHMP2AO43633 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.19□□□□□ -2.22
CHMP2AO43633 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.19□□□□□ -2.22
CHMP2AO43633 MIR4424-201ENST00000585257 86 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
CHMP2AO43633 Z99497.2-201ENST00000603634 310 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 CTHRC1P1-201ENST00000605383 469 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 U2.17-201ENST00000611454 95 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 AC022079.1-201ENST00000621546 602 ntBASIC1.19□□□□□ -2.22
CHMP2AO43633 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CHMP2AO43633 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
CHMP2AO43633 MIR96-201ENST00000362288 78 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 SNORA33-201ENST00000363664 130 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 U3.9-201ENST00000363823 204 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 Y_RNA.553-201ENST00000384670 102 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 DEFB108C-201ENST00000400154 252 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AC004866.1-201ENST00000411748 78 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AC078809.1-201ENST00000427601 140 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.18□□□□□ -2.22
CHMP2AO43633 AC073464.1-201ENST00000429823 534 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.18□□□□□ -2.22
CHMP2AO43633 AC245047.4-201ENST00000433189 144 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 MTCO2P16-201ENST00000436962 677 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 RPS29P27-201ENST00000463711 170 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 MTCO3P38-201ENST00000468910 766 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 HMGN2P9-201ENST00000476875 229 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AC008628.2-201ENST00000502605 298 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 RNU5F-4P-201ENST00000516581 114 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.18□□□□□ -2.22
CHMP2AO43633 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.18□□□□□ -2.22
CHMP2AO43633 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
CHMP2AO43633 RRN3P3-201ENST00000549207 578 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AC025423.5-201ENST00000550230 219 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 CYP3A52P-201ENST00000563326 91 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 MTND1P15-201ENST00000579262 949 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AC068790.2-201ENST00000602601 557 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 RMST_3.1-201ENST00000611651 109 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AC083806.3-201ENST00000614016 455 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 AC009509.4-201ENST00000619202 509 ntBASIC1.18□□□□□ -2.22
CHMP2AO43633 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CHMP2AO43633 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CHMP2AO43633 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CHMP2AO43633 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.17□□□□□ -2.22
CHMP2AO43633 SNORD116-8-201ENST00000384365 95 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 RNU6-331P-201ENST00000384724 107 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 RNU6-1093P-201ENST00000391194 107 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CHMP2AO43633 AL606923.1-201ENST00000406616 190 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.17□□□□□ -2.22
CHMP2AO43633 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.17□□□□□ -2.22
CHMP2AO43633 AC002486.1-201ENST00000435098 391 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 TPTE2P5-203ENST00000458118 728 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 RPL30P7-201ENST00000479312 323 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AC016632.1-201ENST00000503994 196 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CHMP2AO43633 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 RNU6-1041P-201ENST00000516254 102 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.17□□□□□ -2.22
CHMP2AO43633 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.17□□□□□ -2.22
CHMP2AO43633 EIF4A1P12-201ENST00000551910 141 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AP003465.2-201ENST00000602571 373 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AC073648.5-201ENST00000603502 305 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AC009994.1-201ENST00000606889 253 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.17□□□□□ -2.22
CHMP2AO43633 MTND4P14-201ENST00000435799 1354 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CHMP2AO43633 MTND5P35-201ENST00000557537 1720 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AC009541.1-201ENST00000438279 2662 ntBASIC1.17□□□□□ -2.22
CHMP2AO43633 AC010615.1-201ENST00000594254 1764 ntBASIC1.16□□□□□ -2.22
CHMP2AO43633 Y_RNA.1-201ENST00000352915 104 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms