Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNU6-314P-201ENST00000516574 104 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC091135.1-201ENST00000585943 307 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AL162413.1-201ENST00000603198 110 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AL451064.1-201ENST00000607718 471 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC072046.2-201ENST00000618366 268 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC092268.1-201ENST00000342691 405 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.2-201ENST00000362330 96 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.41-201ENST00000362646 102 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RNU4-21P-201ENST00000362802 126 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RNU6-552P-201ENST00000362869 119 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1285P-201ENST00000363480 105 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1322P-201ENST00000364309 107 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1019P-201ENST00000364424 107 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.399-201ENST00000383955 105 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 SNORD116-2-201ENST00000384274 95 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 SNORD116-6-201ENST00000384711 96 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 MIR676-201ENST00000390702 67 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 SNORD37.1-201ENST00000390968 65 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 MIR1262-201ENST00000408276 93 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 BTF3L4P1-201ENST00000413813 468 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC090960.1-201ENST00000421072 306 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 CST2P1-201ENST00000425770 87 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 TIMM9P3-201ENST00000428659 274 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.654-201ENST00000497848 106 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RNU7-193P-201ENST00000516723 65 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 HIF1AP1-201ENST00000553642 175 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC090517.1-201ENST00000569307 266 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC121247.2-201ENST00000604776 136 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 U2.17-201ENST00000611454 95 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC130454.1-201ENST00000622948 401 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 AC090582.1-201ENST00000636321 199 ntBASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1287P-201ENST00000362914 107 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RNU6-553P-201ENST00000364047 96 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.402-201ENST00000383972 102 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RNU6-190P-201ENST00000384154 102 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 SNORD116-1-201ENST00000384335 95 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RNU6-1060P-201ENST00000384664 107 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL663109.1-201ENST00000411498 844 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC078809.1-201ENST00000427601 140 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 OR2AQ1P-201ENST00000451972 200 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL122001.1-201ENST00000457027 370 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 CYP2C59P-201ENST00000457790 269 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RNU2-53P-201ENST00000516257 147 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RNU6-970P-201ENST00000516312 107 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.682-201ENST00000516457 100 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC090115.3-201ENST00000553218 849 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC016925.2-201ENST00000605108 242 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RN7SKP299-201ENST00000606679 301 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AP001596.2-201ENST00000608410 312 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC109347.2-201ENST00000610220 349 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL158063.1-201ENST00000615349 536 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC126177.8-201ENST00000618339 1015 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL158209.2-201ENST00000619266 216 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC243829.3-201ENST00000622177 108 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC073544.1-201ENST00000600110 1595 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 Y_RNA.51-201ENST00000362725 102 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 SNORD115-3-201ENST00000363100 82 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RNU2-36P-201ENST00000410361 191 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RNU6-373P-201ENST00000411247 98 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 MTCYBP8-201ENST00000422855 651 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 TOMM22P2-201ENST00000430735 237 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC015922.2-201ENST00000435593 184 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 MTCO1P19-201ENST00000443487 500 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 ART2BP-201ENST00000453501 499 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 RNU7-66P-201ENST00000459469 62 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC109479.2-201ENST00000517842 174 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC034114.1-201ENST00000520293 285 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 TRAV32-201ENST00000553993 340 ntBASIC0.67□□□□□ -2.3
COL6A6A6NMZ7 AL158211.1-201ENST00000566763 763 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms