Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 RNU6-797P-201ENST00000363101 109 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 RNU4-56P-201ENST00000364700 142 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 RNU6-1274P-201ENST00000384557 107 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 RNU6-1072P-201ENST00000384703 107 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 RNU6-443P-201ENST00000384780 107 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 RNY4P36-201ENST00000391116 96 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 MTND3P23-201ENST00000431980 347 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 RPL23AP50-201ENST00000434149 455 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AL161788.1-201ENST00000441805 169 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 Y_RNA.653-201ENST00000459091 95 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC145146.1-201ENST00000496370 254 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 CKS1BP2-201ENST00000497342 240 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 CBX3P7-201ENST00000532876 502 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC016256.1-201ENST00000547971 354 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC023824.2-201ENST00000566185 400 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 MIR4524B-201ENST00000581569 115 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC010928.2-201ENST00000588017 287 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 AC005014.2-201ENST00000607795 599 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.27□□□□□ -2.05
YIPF1Q9Y548 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
YIPF1Q9Y548 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
YIPF1Q9Y548 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.26□□□□□ -2.05
YIPF1Q9Y548 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
YIPF1Q9Y548 MIR6073-201ENST00000352083 89 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 RNU6-595P-201ENST00000363944 107 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 RNU6-378P-201ENST00000384324 107 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
YIPF1Q9Y548 MIR764-201ENST00000390811 85 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 SNORA12-201ENST00000391162 147 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 MTCO2P27-201ENST00000420740 428 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AC243428.1-201ENST00000421099 264 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AL358453.1-201ENST00000422522 250 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AC003685.2-201ENST00000422795 395 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AL353997.1-201ENST00000432936 108 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.26□□□□□ -2.05
YIPF1Q9Y548 RNU7-26P-201ENST00000458980 63 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AC087477.1-201ENST00000465747 340 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AC107222.1-201ENST00000510899 637 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.26□□□□□ -2.05
YIPF1Q9Y548 CYP4A27P-201ENST00000567218 190 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 ZNF299P-201ENST00000406845 1804 ntBASIC2.26□□□□□ -2.05
YIPF1Q9Y548 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.25□□□□□ -2.05
YIPF1Q9Y548 RNU6-944P-201ENST00000364023 107 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 SNORA67.1-201ENST00000364749 141 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 Y_RNA.419-201ENST00000384041 102 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 RNU6-890P-201ENST00000384121 107 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 MTCYBP2-201ENST00000407745 171 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 RNA5SP201-201ENST00000410316 124 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 Y_RNA.597-201ENST00000410463 100 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 AC236972.2-201ENST00000434979 310 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 CYP2C59P-201ENST00000457790 269 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.25□□□□□ -2.05
YIPF1Q9Y548 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.25□□□□□ -2.05
YIPF1Q9Y548 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.25□□□□□ -2.05
YIPF1Q9Y548 RNU6-567P-201ENST00000516746 107 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.25□□□□□ -2.05
YIPF1Q9Y548 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.25□□□□□ -2.05
YIPF1Q9Y548 MIR4658-201ENST00000584344 65 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 AC005899.2-201ENST00000584353 90 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 AL355297.2-201ENST00000604792 129 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 PCGEM1.1-201ENST00000613431 131 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 AC126177.8-201ENST00000618339 1015 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
YIPF1Q9Y548 ZNF271P-202ENST00000465539 1970 ntBASIC2.25□□□□□ -2.05
YIPF1Q9Y548 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
YIPF1Q9Y548 MTND4P29-201ENST00000503122 1372 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 RNY1P16-201ENST00000363063 111 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 RNU4-9P-201ENST00000364951 139 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 RNU1-138P-201ENST00000384093 164 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 MIR487A-201ENST00000385009 80 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 MIR29B2-201ENST00000385055 81 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 MIR95-201ENST00000385072 81 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
YIPF1Q9Y548 RNU6-1093P-201ENST00000391194 107 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 SNORA75.6-201ENST00000391318 127 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 MIR208B-201ENST00000401172 77 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 RNU2-63P-201ENST00000410792 194 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.24□□□□□ -2.05
YIPF1Q9Y548 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
YIPF1Q9Y548 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.24□□□□□ -2.05
YIPF1Q9Y548 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.24□□□□□ -2.05
YIPF1Q9Y548 snoU13.23-201ENST00000458863 104 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 RPL30P10-201ENST00000488148 337 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
YIPF1Q9Y548 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.24□□□□□ -2.05
YIPF1Q9Y548 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 AL449363.1-201ENST00000617815 186 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 AC008121.3-201ENST00000618726 433 ntBASIC2.24□□□□□ -2.05
YIPF1Q9Y548 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
YIPF1Q9Y548 SCARNA4-201ENST00000629045 128 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms