Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 MIR3199-1-201ENST00000582434 88 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AL713866.2-201ENST00000603579 219 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 Y_RNA.772-201ENST00000606692 102 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AC004832.5-201ENST00000608677 401 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AC090517.3-201ENST00000625170 141 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 AC080128.1-201ENST00000474389 1917 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 Y_RNA.376-201ENST00000365638 108 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 RNU6-245P-201ENST00000384020 107 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 AC091179.3-201ENST00000474761 144 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 RNU6-1143P-201ENST00000516125 104 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 SCARNA3-201ENST00000517097 143 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 HSPE1P18-201ENST00000517602 280 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 RRN3P3-201ENST00000549207 578 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 AL670379.2-201ENST00000604983 252 ntBASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.53□□□□□ -1.84
R3HCC1Q9Y3T6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.179-201ENST00000363844 90 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 RNU6-961P-201ENST00000363893 105 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.461-201ENST00000384263 103 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 RNU6-937P-201ENST00000384325 106 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.483-201ENST00000384380 101 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 MIR215-201ENST00000384858 110 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 MIR887-201ENST00000401258 79 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 AL357075.1-201ENST00000404107 726 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 AC005326.1-201ENST00000429197 123 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 RPL23AP58-201ENST00000440453 469 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 RPS12P18-201ENST00000442381 270 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 RPL39P40-201ENST00000445481 146 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 SNORA40.9-201ENST00000515895 93 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.668-201ENST00000516233 93 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 MIR4300-201ENST00000581016 96 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 AC023043.3-201ENST00000593113 385 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 SNRPGP20-201ENST00000604477 205 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 AC110774.1-201ENST00000623567 2018 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 MTND5P35-201ENST00000557537 1720 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 AC010329.5-201ENST00000623497 2174 ntBASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
R3HCC1Q9Y3T6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 RNU6-727P-201ENST00000363592 107 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 SNORA18.2-201ENST00000383865 132 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 SNORD115-46-201ENST00000390982 71 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 AC090515.1-201ENST00000465295 476 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.683-201ENST00000516508 93 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.713-201ENST00000517013 96 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 RNU6-570P-201ENST00000517051 105 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 MIR5680-201ENST00000577577 84 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 AC007179.3-201ENST00000604976 235 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 MIR376A1-201ENST00000616574 68 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 AC005562.2-201ENST00000618264 111 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 AL161431.1-201ENST00000618966 4205 ntBASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.51□□□□□ -1.85
R3HCC1Q9Y3T6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 RNU1-70P-201ENST00000362618 164 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 RNU6-944P-201ENST00000364023 107 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 SNORD32B-201ENST00000364460 84 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.401-201ENST00000383965 117 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 RNU6-793P-201ENST00000384233 104 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 RNU6-1274P-201ENST00000384557 107 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 U6atac.2-201ENST00000408644 118 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.595-201ENST00000410403 105 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 Y_RNA.597-201ENST00000410463 100 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AC004386.2-201ENST00000441858 148 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AC091153.1-201ENST00000466297 402 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 RNU6-408P-201ENST00000515910 100 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AC105245.1-201ENST00000581934 244 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AC006006.1-201ENST00000603082 144 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 AC096577.2-201ENST00000611455 153 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 MIR7157-201ENST00000635801 60 ntBASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
R3HCC1Q9Y3T6 LINC02555-201ENST00000563933 1951 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms