Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 AC134026.1-201ENST00000623249 2239 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 MIR372-201ENST00000362225 67 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-944P-201ENST00000364023 107 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 RNA5SP97-201ENST00000365006 84 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 CD24P4-201ENST00000382840 243 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 RNU1-101P-201ENST00000391171 127 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 Z75741.1-201ENST00000446793 314 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 MIR3144-201ENST00000579460 79 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 AC023043.3-201ENST00000593113 385 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 MIR6500-201ENST00000622700 86 ntBASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.27□□□□□ -1.89
SF3B6Q9Y3B4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 MAPK10-322ENST00000641485 4530 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-486P-201ENST00000363116 107 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RNA5SP479-201ENST00000364858 117 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 SNORA51.4-201ENST00000364993 124 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 Y_RNA.571-201ENST00000384753 98 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 MIR586-201ENST00000385035 97 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RNA5SP424-201ENST00000390988 115 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 AL357075.1-201ENST00000404107 726 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RNU2-2P-201ENST00000410396 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 AL451074.5-201ENST00000415894 435 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 HMGN2P9-201ENST00000476875 229 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-346P-201ENST00000516288 111 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 SUMO2P18-201ENST00000518873 252 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 AC136628.3-201ENST00000521868 290 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RPL17P51-201ENST00000605218 238 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RNU2-4P-201ENST00000606190 192 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.15-201ENST00000611544 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.16-201ENST00000613119 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.12-201ENST00000613778 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.9-201ENST00000615427 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.11-201ENST00000616345 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.2-201ENST00000616535 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 MIR6875-201ENST00000617506 72 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.3-201ENST00000617785 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.19-201ENST00000618602 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 RNU2-1-201ENST00000618664 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.6-201ENST00000619225 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.5-201ENST00000619465 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 U2.10-201ENST00000620268 191 ntBASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B6Q9Y3B4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 AC010329.5-201ENST00000623497 2174 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 AC068647.1-201ENST00000489539 2265 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 RNU1-72P-201ENST00000362976 153 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 SNORD6-201ENST00000365444 73 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-394P-201ENST00000410735 107 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-1135P-201ENST00000411083 103 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 RPS4XP2-201ENST00000458402 793 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 RNU7-14P-201ENST00000459331 62 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 SRIP1-201ENST00000489235 288 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 AC008011.1-201ENST00000545989 227 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 AC099778.2-201ENST00000610904 211 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 AC022149.2-201ENST00000621061 203 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 AC068700.1-201ENST00000565862 3754 ntBASIC3.25□□□□□ -1.89
SF3B6Q9Y3B4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 Y_RNA.398-201ENST00000383952 99 ntBASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 SNORA40.19-201ENST00000390846 128 ntBASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 RNU6-855P-201ENST00000410395 104 ntBASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 AL159169.1-201ENST00000421119 127 ntBASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 AC006539.3-201ENST00000454258 129 ntBASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SF3B6Q9Y3B4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms