Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 SNORD59.2-201ENST00000516873 68 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 AC022616.8-201ENST00000533569 253 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 MIR7151-201ENST00000617477 60 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 MIR6875-201ENST00000617506 72 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 snoZ196.1-201ENST00000625269 89 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 AC007256.1-201ENST00000392253 2765 ntBASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXD3Q9UJU5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 Z82209.1-201ENST00000422141 2135 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 MIR367-201ENST00000362299 68 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 RNA5SP139-201ENST00000364340 117 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 RNU6-234P-201ENST00000365229 104 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 RNU6-1228P-201ENST00000391014 107 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 RNU6-221P-201ENST00000459541 99 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 RPL36AP21-201ENST00000490372 323 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 AC018630.3-201ENST00000542637 96 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 MIR548AY-201ENST00000617669 107 ntBASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXD3Q9UJU5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 RNU6-975P-201ENST00000384296 105 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 PTMAP2-201ENST00000397627 327 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 RPL30P13-201ENST00000418873 348 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AL121890.1-201ENST00000435457 205 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 HSPE1P21-201ENST00000438283 308 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AC006011.1-201ENST00000442758 349 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 RPS26P15-201ENST00000488067 348 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 SCARNA8-201ENST00000515924 131 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 RNU7-115P-201ENST00000516433 55 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AC023632.4-201ENST00000517783 191 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AL606490.9-201ENST00000603331 271 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AC110741.2-201ENST00000605278 268 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 AC110079.1-202ENST00000635213 138 ntBASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
FOXD3Q9UJU5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
FOXD3Q9UJU5 SNORA27.1-201ENST00000362604 124 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 SNORA20B-201ENST00000384220 132 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 Y_RNA.572-201ENST00000384757 98 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 MIR513C-201ENST00000401352 84 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 AL355796.1-201ENST00000406706 323 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 RNU6-257P-201ENST00000410238 98 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 MICF-203ENST00000432679 129 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 AC010598.1-201ENST00000510378 103 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 RNU6-453P-201ENST00000516819 85 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 AC109329.2-201ENST00000519658 482 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 MIR3158-1-201ENST00000583596 81 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 UCA1.1-201ENST00000620952 75 ntBASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.65□□□□□ -1.83
FOXD3Q9UJU5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 AC010332.2-201ENST00000613083 1904 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 Y_RNA.124-201ENST00000363339 93 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 Y_RNA.229-201ENST00000364347 113 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 SNORD31B-201ENST00000364977 69 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 RNU6-1323P-201ENST00000384025 107 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 RNY3P5-201ENST00000384127 102 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 RNU6-1274P-201ENST00000384557 107 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 MIR518C-201ENST00000384822 101 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 MIR200C-201ENST00000384980 68 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 SNORA40-201ENST00000388090 126 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 RNU6-1154P-201ENST00000391001 104 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 CYCSP19-201ENST00000411715 316 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 AC010154.1-201ENST00000425857 269 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 AL121914.1-201ENST00000450188 156 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 AC245047.8-201ENST00000456455 284 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 RPS26P55-201ENST00000471178 356 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 AC025554.1-201ENST00000505641 188 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 RNU6-1337P-201ENST00000516525 95 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 SNORA67.7-201ENST00000516664 135 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 RNU7-143P-201ENST00000516781 65 ntBASIC3.64□□□□□ -1.83
FOXD3Q9UJU5 RNU7-116P-201ENST00000516940 62 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms