Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 AL162395.1-201ENST00000457882 422 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 RNU6-1146P-201ENST00000516282 102 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 SNORA31.10-201ENST00000516482 106 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 AC023050.3-201ENST00000541142 333 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 AP001596.2-201ENST00000608410 312 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 AP000484.1-201ENST00000620067 1252 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS29Q9UBQ0 RNU4-1-201ENST00000363925 141 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 Y_RNA.302-201ENST00000364997 102 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 RNU6-1235P-201ENST00000384559 107 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 RNU6-498P-201ENST00000459468 107 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 AC010587.1-201ENST00000505809 469 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 AC105185.1-201ENST00000518705 535 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 AP003168.1-201ENST00000530091 307 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 Z99289.3-201ENST00000605586 594 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 AC064807.4-201ENST00000607201 407 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 AC116165.2-201ENST00000616705 206 ntBASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS29Q9UBQ0 RNU6-562P-201ENST00000362731 107 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 Y_RNA.504-201ENST00000384481 104 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 RNU6-417P-201ENST00000384712 107 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 RN7SKP200-201ENST00000410564 320 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 TIMM9P3-201ENST00000428659 274 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL035398.1-201ENST00000430869 322 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL606517.2-201ENST00000442855 241 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL133217.1-201ENST00000450980 425 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AC013470.1-201ENST00000453438 462 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AC098869.1-201ENST00000481627 292 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 RPS26P48-201ENST00000491713 339 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AC112204.1-201ENST00000502591 103 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 MTND4LP18-201ENST00000526864 291 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AC007834.2-201ENST00000536310 343 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL137100.2-201ENST00000555786 315 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL390123.1-201ENST00000603216 237 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AC080078.2-201ENST00000603766 501 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL136221.1-201ENST00000621449 509 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL603839.4-201ENST00000624658 1005 ntBASIC0.39□□□□□ -2.35
VPS29Q9UBQ0 AL442644.1-201ENST00000454390 3105 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 RNU6-179P-201ENST00000363350 107 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 RNU4-76P-201ENST00000364509 141 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 SNORA36A-201ENST00000384221 132 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 MIR499A-201ENST00000384903 122 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 MIR10B-201ENST00000385011 110 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 SNORD41-201ENST00000386967 70 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 RPS29P13-201ENST00000402041 169 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 ELOCP4-201ENST00000420090 333 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 RPL37P21-201ENST00000435890 276 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 AC016717.1-201ENST00000448918 286 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 RNU6-947P-201ENST00000516264 106 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 RNU6-948P-201ENST00000516374 107 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 DEFB131C-201ENST00000528817 165 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 AC008250.2-201ENST00000615261 205 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 AL513423.1-201ENST00000621695 132 ntBASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.38□□□□□ -2.35
VPS29Q9UBQ0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 Y_RNA.22-201ENST00000362492 102 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 RNU6-931P-201ENST00000363850 107 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 SNORD115.1-201ENST00000391109 76 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AC090960.1-201ENST00000421072 306 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 RPS27AP14-201ENST00000422868 454 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 FABP5P4-201ENST00000437203 171 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 RPEP5-201ENST00000441137 268 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 RNU7-21P-201ENST00000459430 62 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AC104982.1-201ENST00000478775 574 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AC091874.1-201ENST00000511402 339 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AC018659.1-201ENST00000551083 169 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AC104458.1-201ENST00000608243 463 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AC006001.4-201ENST00000622243 395 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 AL359697.1-201ENST00000624879 587 ntBASIC0.37□□□□□ -2.35
VPS29Q9UBQ0 RNU5E-10P-201ENST00000363506 118 ntBASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 RNU4-92P-201ENST00000363783 136 ntBASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 RNU4-68P-201ENST00000364314 141 ntBASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 Y_RNA.287-201ENST00000364853 94 ntBASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 RNU6-116P-201ENST00000384042 109 ntBASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 RNA5SP467-201ENST00000391274 118 ntBASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 RNU2-8P-201ENST00000410727 190 ntBASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.36□□□□□ -2.35
VPS29Q9UBQ0 AC008628.2-201ENST00000502605 298 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms