Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LRFN1Q9P244 Y_RNA.31-201ENST00000362574 102 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 RNU1-76P-201ENST00000362903 159 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 SNORA63-201ENST00000363450 132 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 RNU6-234P-201ENST00000365229 104 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 RNU6-1040P-201ENST00000383974 107 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 RNU1-52P-201ENST00000384190 164 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 AL590004.1-201ENST00000405321 300 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 MIR548P-201ENST00000408336 84 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 GSTA11P-201ENST00000452866 669 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.61□□□□□ -1.99
LRFN1Q9P244 Y_RNA.631-201ENST00000459607 101 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 RPL17P19-201ENST00000489069 552 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 ANXA2P1-201ENST00000505539 926 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.61□□□□□ -1.99
LRFN1Q9P244 RNU6-470P-201ENST00000515954 104 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 RNU6-120P-201ENST00000516077 103 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 SCARNA15.1-201ENST00000516384 125 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 RNU6-1198P-201ENST00000516904 67 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 RNA5SP54-201ENST00000516951 92 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.61□□□□□ -1.99
LRFN1Q9P244 ELOCP31-201ENST00000540463 467 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.61□□□□□ -1.99
LRFN1Q9P244 MIR3945-201ENST00000581853 98 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 MIR4435-1-201ENST00000582552 80 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 SNRPGP17-201ENST00000603780 214 ntBASIC2.61□□□□□ -1.99
LRFN1Q9P244 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.61□□□□□ -1.99
LRFN1Q9P244 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LRFN1Q9P244 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
LRFN1Q9P244 BX322639.1-202ENST00000423987 2213 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 RNU4-82P-201ENST00000362443 140 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.216-201ENST00000364205 93 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.405-201ENST00000383979 100 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.445-201ENST00000384168 102 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.451-201ENST00000384200 100 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.524-201ENST00000384564 100 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.561-201ENST00000384694 100 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 MTCO3P29-201ENST00000432119 779 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.6□□□□□ -1.99
LRFN1Q9P244 AL353997.1-201ENST00000432936 108 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 AL137792.2-201ENST00000443484 235 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.6□□□□□ -1.99
LRFN1Q9P244 RN7SKP43-201ENST00000516173 320 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.6□□□□□ -1.99
LRFN1Q9P244 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.6□□□□□ -1.99
LRFN1Q9P244 SNRPGP18-201ENST00000553000 214 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 AC027288.2-201ENST00000553028 243 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 AC022432.1-201ENST00000595739 310 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 AC100812.1-201ENST00000607622 580 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.812-201ENST00000610788 101 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.784-201ENST00000613803 101 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.787-201ENST00000616522 101 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.780-201ENST00000617336 101 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 Y_RNA.801-201ENST00000619005 101 ntBASIC2.6□□□□□ -1.99
LRFN1Q9P244 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LRFN1Q9P244 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LRFN1Q9P244 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.59□□□□□ -1.99
LRFN1Q9P244 Y_RNA.5-201ENST00000362334 102 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 Y_RNA.319-201ENST00000365138 92 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 MIR487A-201ENST00000385009 80 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 RNU6-308P-201ENST00000390957 107 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 MTCYBP10-201ENST00000424905 650 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 AL035666.1-201ENST00000446195 348 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 AL118496.2-201ENST00000448300 230 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.59□□□□□ -1.99
LRFN1Q9P244 AC022493.2-201ENST00000506122 481 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.59□□□□□ -1.99
LRFN1Q9P244 SNORA4.4-201ENST00000515921 135 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 RNA5SP76-201ENST00000516277 87 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 Y_RNA.706-201ENST00000516933 99 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 RNU6-58P-201ENST00000517143 103 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.59□□□□□ -1.99
LRFN1Q9P244 DEFB131C-201ENST00000528817 165 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LRFN1Q9P244 AC107871.2-201ENST00000612894 502 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 AC005562.2-201ENST00000618264 111 ntBASIC2.59□□□□□ -1.99
LRFN1Q9P244 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.59□□□□□ -2
LRFN1Q9P244 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.59□□□□□ -2
LRFN1Q9P244 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
LRFN1Q9P244 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 RNU6-1115P-201ENST00000362490 106 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 Y_RNA.112-201ENST00000363250 102 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 Y_RNA.463-201ENST00000384271 102 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 RNU6-541P-201ENST00000384709 110 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 MIR512-1-201ENST00000384913 84 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 MIR320B2-201ENST00000408479 138 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 AC007098.1-201ENST00000420122 367 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 PMCHL1-202ENST00000423102 261 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.58□□□□□ -2
LRFN1Q9P244 AL163540.1-201ENST00000485382 386 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 AC107032.1-201ENST00000485945 480 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.58□□□□□ -2
LRFN1Q9P244 MIR449C-201ENST00000516047 92 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 Y_RNA.711-201ENST00000516993 102 ntBASIC2.58□□□□□ -2
LRFN1Q9P244 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.58□□□□□ -2
LRFN1Q9P244 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms