Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 MRPS36P4-201ENST00000534436 298 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 MIR3169-201ENST00000578032 83 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 MIR4648-201ENST00000580107 72 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 AC124303.1-201ENST00000605703 360 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 AC019193.3-201ENST00000609144 554 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 AC100810.6-201ENST00000638068 285 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 MTND4P5-201ENST00000435821 1374 ntBASIC2.22□□□□□ -2.05
BLOC1S4Q9NUP1 Y_RNA.151-201ENST00000363566 112 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 SNORA18.2-201ENST00000383865 132 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 MIR517A-201ENST00000385001 87 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 FCF1P9-201ENST00000412546 282 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 EIF1P1-201ENST00000421436 341 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 MTND1P11-201ENST00000456661 876 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 AC007215.1-201ENST00000464893 276 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 AC087477.1-201ENST00000465747 340 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 RPS29P21-201ENST00000496272 170 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 RNU6-864P-201ENST00000516256 108 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 RNU2-44P-201ENST00000516795 194 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 RNU1-40P-201ENST00000516816 164 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 RNU1-97P-201ENST00000516872 164 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 AC002984.1-201ENST00000591692 448 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 AL590240.4-201ENST00000616908 390 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 SCARNA4-201ENST00000629045 128 ntBASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.21□□□□□ -2.06
BLOC1S4Q9NUP1 AC092881.1-201ENST00000638218 2733 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 RNU4-9P-201ENST00000364951 139 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 RNA5SP501-201ENST00000410990 112 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 AC139712.2-201ENST00000424302 339 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 RNA5SP57-201ENST00000459463 123 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 AC114982.1-201ENST00000469402 321 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 RPS29P25-201ENST00000481709 171 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 RNU2-34P-201ENST00000516534 121 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 RNA5SP54-201ENST00000516951 92 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 AC068790.6-201ENST00000602558 258 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 7SK.7-201ENST00000603504 247 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 AP000907.4-201ENST00000604143 237 ntBASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
BLOC1S4Q9NUP1 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 MTND1P23-201ENST00000416931 372 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 AC074290.1-201ENST00000448883 135 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 TRBV12-1-201ENST00000479785 344 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 RPL23AP75-201ENST00000491601 451 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 AF186996.7-201ENST00000492781 209 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 SUMO2P18-201ENST00000518873 252 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 MIR4753-201ENST00000585119 83 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.19□□□□□ -2.06
BLOC1S4Q9NUP1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AL359851.1-201ENST00000569460 4997 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 MIR548F1-201ENST00000408667 84 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AL139396.1-201ENST00000421137 167 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AL590632.1-201ENST00000424289 371 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AL357134.1-201ENST00000445848 426 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AC112492.4-201ENST00000456549 352 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AC092989.1-201ENST00000481235 277 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AP000889.1-201ENST00000530968 660 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 MIR5006-201ENST00000583027 110 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AC008749.1-201ENST00000597650 306 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AC016727.2-201ENST00000603988 621 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AC009318.2-201ENST00000610917 651 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AC002553.4-201ENST00000616896 331 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 AC006504.8-201ENST00000621046 635 ntBASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
BLOC1S4Q9NUP1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 SNORD50.1-201ENST00000362987 71 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 SNORD115-32-201ENST00000364079 82 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 SNORD114-6-201ENST00000364393 72 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 SNORA70B-201ENST00000384210 135 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 RNU6-192P-201ENST00000391253 100 ntBASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
BLOC1S4Q9NUP1 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms