Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 AC010297.1-201ENST00000623948 149 ntBASIC2.31□□□□□ -2.04
CTDSP1Q9GZU7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.31□□□□□ -2.04
CTDSP1Q9GZU7 AL035425.3-201ENST00000564206 4996 ntBASIC2.31□□□□□ -2.04
CTDSP1Q9GZU7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CTDSP1Q9GZU7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CTDSP1Q9GZU7 AC009487.4-201ENST00000624969 3585 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 RNA5SP361-201ENST00000362686 118 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 RNU1-35P-201ENST00000362782 153 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 RNU1-91P-201ENST00000364746 163 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 XGY1-201ENST00000381172 446 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 Y_RNA.526-201ENST00000384572 110 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 AL033519.2-201ENST00000403958 392 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 RNA5SP504-201ENST00000410676 117 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 AC096644.2-201ENST00000429278 159 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 AC010095.1-201ENST00000443543 144 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 AC074133.1-201ENST00000515696 183 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 MIR4753-201ENST00000585119 83 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 AL161756.2-201ENST00000604597 246 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 AC005592.1-201ENST00000566527 1640 ntBASIC2.3□□□□□ -2.04
CTDSP1Q9GZU7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 RNU6-545P-201ENST00000362681 104 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 RNA5SP51-201ENST00000364750 119 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 DEFA7P-201ENST00000382676 285 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 SNORA22B-201ENST00000383876 138 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 SNORD14D-201ENST00000384390 87 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 MIR181A2-201ENST00000384863 110 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 MIR29C-201ENST00000385231 88 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 SNORA40.19-201ENST00000390846 128 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 MIR1262-201ENST00000408276 93 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 AC091390.1-201ENST00000433904 331 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 RPS3AP12-201ENST00000443616 753 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 AC074290.1-201ENST00000448883 135 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 HMGN2P9-201ENST00000476875 229 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 RNU2-34P-201ENST00000516534 121 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 IGKV2-26-201ENST00000518305 343 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 MIR2682-201ENST00000580305 110 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 AC068724.3-201ENST00000625906 87 ntBASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
CTDSP1Q9GZU7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 MIR6073-201ENST00000352083 89 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 Y_RNA.132-201ENST00000363421 102 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 U3.8-201ENST00000363675 217 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 RNA5SP387-201ENST00000364226 106 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 SNORD12B-201ENST00000410433 91 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 PCNPP5-201ENST00000452246 481 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 AC008155.2-201ENST00000464337 397 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 SCARNA13-201ENST00000516672 275 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 RNU1-104P-201ENST00000517280 175 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 HSBP1P1-201ENST00000555205 166 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 VN1R85P-201ENST00000601587 426 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 AC073657.2-201ENST00000605661 303 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 SNORD14A-201ENST00000606526 91 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 MIR6810-201ENST00000622701 70 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 AL078596.1-201ENST00000624856 447 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CTDSP1Q9GZU7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.28□□□□□ -2.05
CTDSP1Q9GZU7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 RNU6-727P-201ENST00000363592 107 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 RNU6-975P-201ENST00000384296 105 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 SNORD78.2-201ENST00000391076 69 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 MRPL42P3-201ENST00000401492 326 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 AL356057.3-201ENST00000402607 340 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 SDAD1P3-201ENST00000427380 333 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 CYCSP4-201ENST00000429682 331 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 MTCO1P44-201ENST00000441935 243 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 AL357134.1-201ENST00000445848 426 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 AC091153.1-201ENST00000466297 402 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 AC067942.3-201ENST00000512025 362 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 RNU1-117P-201ENST00000517041 158 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 MIR3605-201ENST00000583214 100 ntBASIC2.27□□□□□ -2.05
CTDSP1Q9GZU7 AL031274.2-201ENST00000599419 203 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms