Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 MIR449C-201ENST00000516047 92 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 SNORA70.18-201ENST00000516696 98 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AC233702.2-202ENST00000562547 291 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AC090616.3-201ENST00000582184 217 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 MIR3616-201ENST00000584070 92 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AL356280.1-201ENST00000603614 379 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AC005000.2-201ENST00000605468 310 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 SNORD11B-201ENST00000607707 90 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM55Q9BYV6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
TRIM55Q9BYV6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM55Q9BYV6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 RNU6-702P-201ENST00000364982 107 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.396-201ENST00000383949 103 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.415-201ENST00000384012 112 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.461-201ENST00000384263 103 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 RNU6-505P-201ENST00000384427 107 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.556-201ENST00000384677 113 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 AC091826.1-201ENST00000514065 313 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 AC074133.1-201ENST00000515696 183 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 RN7SKP57-201ENST00000517248 293 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 AC018630.3-201ENST00000542637 96 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 MIR3117-201ENST00000584034 78 ntBASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM55Q9BYV6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 RNU6-472P-201ENST00000384299 107 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 MIR95-201ENST00000385072 81 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 RN7SKP220-201ENST00000410611 288 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AL161788.1-201ENST00000441805 169 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AC115115.1-201ENST00000449927 248 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AC098869.1-201ENST00000481627 292 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 CKS1BP2-201ENST00000497342 240 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 RNU5F-4P-201ENST00000516581 114 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 RNU6-1098P-201ENST00000516772 96 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AC018448.1-201ENST00000552843 316 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AC078899.3-201ENST00000599065 212 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM55Q9BYV6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.376-201ENST00000365638 108 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 MIR627-201ENST00000384979 97 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 SNORA11.2-201ENST00000408318 127 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 RNA5SP504-201ENST00000410676 117 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 ELOCP21-201ENST00000412558 336 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 Z96811.1-201ENST00000445880 108 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 CYP2C59P-201ENST00000457790 269 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 RNU6-625P-201ENST00000459412 107 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 RPL21P10-201ENST00000463521 490 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 RPS23P5-201ENST00000495419 428 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 RNU1-117P-201ENST00000517041 158 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 AC245166.1-201ENST00000521012 253 ntBASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
TRIM55Q9BYV6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 Z82209.1-201ENST00000422141 2135 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 RNU6-626P-201ENST00000363354 107 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 RNU1-33P-201ENST00000364249 162 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 RNU6-20P-201ENST00000384106 107 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 SNORD63-201ENST00000384262 68 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.462-201ENST00000384268 102 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 MT-TW-201ENST00000387382 68 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 MIR1302-6-201ENST00000408466 90 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 AC104332.2-201ENST00000429959 156 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 AC025518.1-201ENST00000479856 347 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 Y_RNA.668-201ENST00000516233 93 ntBASIC3.37□□□□□ -1.87
TRIM55Q9BYV6 RNU6-570P-201ENST00000517051 105 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms