Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 GVINP1-202ENST00000531871 7271 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MAPK10-344ENST00000641718 3746 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU1-5P-201ENST00000362684 144 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP485-201ENST00000365053 119 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU6-949P-201ENST00000384040 107 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR551B-201ENST00000384984 96 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 PTMAP2-201ENST00000397627 327 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 FO393413.1-201ENST00000402892 195 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA77.2-201ENST00000408571 112 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR1282-201ENST00000408865 101 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP431-201ENST00000410312 120 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU4-64P-201ENST00000410795 131 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 HMGN2P35-201ENST00000412164 270 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 MRPS21P5-201ENST00000417885 231 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC244098.2-201ENST00000422068 99 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC244023.1-201ENST00000426884 112 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC118758.1-202ENST00000454719 225 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL83P-201ENST00000468131 297 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RPS26P39-201ENST00000469206 341 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 GLRXP3-201ENST00000470810 321 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 GM2AP2-201ENST00000491764 562 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL57P-201ENST00000493687 290 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC022206.1-201ENST00000495947 347 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC113367.2-201ENST00000505749 160 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU7-99P-201ENST00000516271 62 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP206-201ENST00000516703 121 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 SNRPCP6-201ENST00000528310 210 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC021006.3-201ENST00000530771 192 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC018659.1-201ENST00000551083 169 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AC242498.1-201ENST00000604134 111 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR8055-201ENST00000610739 97 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC1.2□□□□□ -2.22
KRTAP4-4Q9BYR3 AL021997.2-201ENST00000615674 271 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms