Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 RNU4-70P-201ENST00000384579 139 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 Y_RNA.539-201ENST00000384635 107 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 MIR215-201ENST00000384858 110 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 RNU2-20P-201ENST00000410425 191 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 RPL30P1-201ENST00000488676 339 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 RPL23AP49-201ENST00000492925 468 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 AC091874.1-201ENST00000511402 339 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 SNORA31.1-201ENST00000515993 133 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 SNORA31.5-201ENST00000516190 133 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 Y_RNA.706-201ENST00000516933 99 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 CKS1BP7-201ENST00000522230 235 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 MRPS36P4-201ENST00000534436 298 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 AC010186.2-204ENST00000537668 439 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 MIR4300-201ENST00000581016 96 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 MIR3124-201ENST00000582636 67 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 AC010900.2-201ENST00000604508 210 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 RMST_6.1-201ENST00000611980 203 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 AC002076.2-201ENST00000617362 122 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 MIR6076-201ENST00000617521 113 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 LINC02555-201ENST00000563933 1951 ntBASIC2.88□□□□□ -1.95
SH2D3AQ9BRG2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AC110491.1-201ENST00000562191 2010 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNU6-222P-201ENST00000362438 107 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNU4-82P-201ENST00000362443 140 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNU6-1301P-201ENST00000362724 104 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNU5B-2P-201ENST00000363036 113 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNU6-527P-201ENST00000363425 104 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 SNORA20.1-201ENST00000364790 130 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 Y_RNA.785-201ENST00000384290 109 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 SNORD116-20-201ENST00000384529 92 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 MIR487A-201ENST00000385009 80 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNU1-139P-201ENST00000391307 165 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 FTH1P15-201ENST00000406984 280 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 EIF1AXP1-201ENST00000419267 435 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AL590135.1-201ENST00000422215 156 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AC104332.2-201ENST00000429959 156 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AL445305.1-201ENST00000432577 575 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 HMGN2P10-201ENST00000448085 265 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNU7-87P-201ENST00000459343 62 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 TOMM22P6-201ENST00000465035 409 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RPL30P14-201ENST00000482744 348 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNA5SP320-201ENST00000516263 124 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 RNU6-111P-201ENST00000517179 105 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AC007536.1-201ENST00000533382 349 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 SNORA43.4-201ENST00000629559 138 ntBASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.87□□□□□ -1.95
SH2D3AQ9BRG2 AC233981.2-201ENST00000611524 1614 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 RNU6-200P-201ENST00000364743 107 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 SNORA14A-201ENST00000364773 135 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 Y_RNA.439-201ENST00000384119 94 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 Y_RNA.581-201ENST00000391017 97 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 MIR548H3-201ENST00000408771 118 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 RNU2-14P-201ENST00000411053 191 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 EIF1P2-201ENST00000428233 350 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 AC009296.1-201ENST00000443146 155 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 AC124916.1-201ENST00000444020 547 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 RPS26P21-201ENST00000475397 348 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 MRPL42P6-201ENST00000486397 371 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 AF186996.7-201ENST00000492781 209 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 HMGB3P17-201ENST00000504195 649 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 Y_RNA.673-201ENST00000516306 88 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 RNU5B-3P-201ENST00000516601 115 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 Y_RNA.700-201ENST00000516806 100 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 NACAP3-201ENST00000552100 481 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 MIR5571-201ENST00000577998 113 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 HMGN2P15-201ENST00000585707 270 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 AC023043.3-201ENST00000593113 385 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 AC009779.6-201ENST00000603972 165 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 AC009541.1-201ENST00000438279 2662 ntBASIC2.86□□□□□ -1.95
SH2D3AQ9BRG2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 RNU6-137P-201ENST00000363680 108 ntBASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 SNORD63-201ENST00000384262 68 ntBASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 AL603908.1-201ENST00000406098 201 ntBASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 AC074117.2-201ENST00000417130 397 ntBASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 snoU13.28-201ENST00000459235 104 ntBASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 RNU6-581P-201ENST00000516214 105 ntBASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 RN7SKP40-201ENST00000517211 242 ntBASIC2.85□□□□□ -1.95
SH2D3AQ9BRG2 AC006199.1-201ENST00000548728 219 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms