Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
USB1Q9BQ65 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USB1Q9BQ65 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.19□□□□□ -1.74
USB1Q9BQ65 Y_RNA.323-201ENST00000365157 109 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 RNU6-1235P-201ENST00000384559 107 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 RNA5SP372-201ENST00000390836 115 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 U3.30-201ENST00000391308 210 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 HMGN2P8-201ENST00000391458 268 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 AC016909.1-201ENST00000415916 166 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.19□□□□□ -1.74
USB1Q9BQ65 RNU6-498P-201ENST00000459468 107 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 AC093663.1-201ENST00000497190 394 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 AC097462.1-201ENST00000514125 324 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 AC005868.1-201ENST00000536421 331 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 MIR4330-201ENST00000579077 105 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 U6.73-201ENST00000619194 103 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 MIR6853-201ENST00000619642 74 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 AL035470.1-201ENST00000622571 220 ntBASIC4.19□□□□□ -1.74
USB1Q9BQ65 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.19□□□□□ -1.74
USB1Q9BQ65 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USB1Q9BQ65 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USB1Q9BQ65 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USB1Q9BQ65 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USB1Q9BQ65 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USB1Q9BQ65 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.18□□□□□ -1.74
USB1Q9BQ65 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USB1Q9BQ65 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.18□□□□□ -1.74
USB1Q9BQ65 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.18□□□□□ -1.74
USB1Q9BQ65 SNORA71.2-201ENST00000364941 134 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 Y_RNA.366-201ENST00000365540 102 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 RNA5SP39-201ENST00000411245 120 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 HMGN2P31-201ENST00000432430 273 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 RPS29P21-201ENST00000496272 170 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 RNU7-172P-201ENST00000517125 64 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.18□□□□□ -1.74
USB1Q9BQ65 RN7SL703P-201ENST00000578485 302 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 MIR4438-201ENST00000585271 93 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 AC062037.1-201ENST00000605302 128 ntBASIC4.18□□□□□ -1.74
USB1Q9BQ65 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.18□□□□□ -1.74
USB1Q9BQ65 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
USB1Q9BQ65 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.18□□□□□ -1.74
USB1Q9BQ65 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
USB1Q9BQ65 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USB1Q9BQ65 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
USB1Q9BQ65 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USB1Q9BQ65 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 RNA5SP173-201ENST00000364857 136 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 MIR488-201ENST00000365739 83 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 RNA5SP397-201ENST00000391323 118 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 RPS3AP1-201ENST00000413190 320 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 RN7SL738P-201ENST00000470264 297 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 AC006463.2-201ENST00000473326 348 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 RNA5SP249-201ENST00000516127 99 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 RNU6-638P-201ENST00000516582 104 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 RNU6-1149P-201ENST00000516810 97 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 RNA5SP392-201ENST00000516905 112 ntBASIC4.17□□□□□ -1.74
USB1Q9BQ65 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USB1Q9BQ65 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
USB1Q9BQ65 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.17□□□□□ -1.74
USB1Q9BQ65 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USB1Q9BQ65 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.16□□□□□ -1.74
USB1Q9BQ65 MIR93-201ENST00000385024 80 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 RNU6-1275P-201ENST00000391087 107 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 MIR1183-201ENST00000408856 89 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 RNA5SP104-201ENST00000410989 118 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 RN7SKP216-201ENST00000411050 312 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 RNU2-32P-201ENST00000411193 191 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 AC011753.3-201ENST00000443436 406 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 AC006445.1-201ENST00000491925 405 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.16□□□□□ -1.74
USB1Q9BQ65 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.16□□□□□ -1.74
USB1Q9BQ65 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.16□□□□□ -1.74
USB1Q9BQ65 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
USB1Q9BQ65 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
USB1Q9BQ65 AP003122.5-201ENST00000527668 3766 ntBASIC4.15□□□□□ -1.74
USB1Q9BQ65 DHX9P1-201ENST00000436565 3076 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 RNA5SP191-201ENST00000362585 102 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 SNORA70F-201ENST00000384142 135 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 SNORD61-201ENST00000384252 73 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 DBIP2-201ENST00000419076 262 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 RN7SL481P-201ENST00000477764 299 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 RPL21P129-201ENST00000491732 478 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 RNU6-1270P-201ENST00000517128 108 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 ATP5J2P6-201ENST00000565203 266 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 CYCSP40-201ENST00000575927 294 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 AC103810.1-201ENST00000579873 453 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 MIR7641-1-201ENST00000627518 61 ntBASIC4.15□□□□□ -1.75
USB1Q9BQ65 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
USB1Q9BQ65 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms