Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RAD9AQ99638 RNU4-56P-201ENST00000364700 142 ntBASIC2.21□□□□□ -2.06
RAD9AQ99638 RNU1-148P-201ENST00000384472 162 ntBASIC2.21□□□□□ -2.06
RAD9AQ99638 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RAD9AQ99638 SNORA26.3-201ENST00000391119 136 ntBASIC2.21□□□□□ -2.06
RAD9AQ99638 AC108667.1-201ENST00000428618 249 ntBASIC2.21□□□□□ -2.06
RAD9AQ99638 DAP3P1-201ENST00000441522 278 ntBASIC2.21□□□□□ -2.06
RAD9AQ99638 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.21□□□□□ -2.06
RAD9AQ99638 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.21□□□□□ -2.06
RAD9AQ99638 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.21□□□□□ -2.06
RAD9AQ99638 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.21□□□□□ -2.06
RAD9AQ99638 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.21□□□□□ -2.06
RAD9AQ99638 AL034555.1-201ENST00000604816 211 ntBASIC2.21□□□□□ -2.06
RAD9AQ99638 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
RAD9AQ99638 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.21□□□□□ -2.06
RAD9AQ99638 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
RAD9AQ99638 Y_RNA.339-201ENST00000365325 102 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RAD9AQ99638 SNORA36A-201ENST00000384221 132 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 RNY3P14-201ENST00000384309 102 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.2□□□□□ -2.06
RAD9AQ99638 EIF1AXP1-201ENST00000419267 435 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AL590556.1-201ENST00000423231 483 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.2□□□□□ -2.06
RAD9AQ99638 RPS3AP52-201ENST00000435639 297 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AC107399.1-201ENST00000451226 265 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.2□□□□□ -2.06
RAD9AQ99638 ACA59.1-201ENST00000515966 143 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AC016256.1-201ENST00000547971 354 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AC021231.3-201ENST00000558497 370 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AC110588.1-201ENST00000559699 137 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 UBE2V2P2-201ENST00000587677 504 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.2□□□□□ -2.06
RAD9AQ99638 TPTEP1-208ENST00000636884 213 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 AL450472.1-202ENST00000637286 180 ntBASIC2.2□□□□□ -2.06
RAD9AQ99638 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RAD9AQ99638 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.19□□□□□ -2.06
RAD9AQ99638 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 RNU6-1274P-201ENST00000384557 107 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 AL356432.1-201ENST00000405809 419 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 HMGB3P2-201ENST00000411913 584 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.19□□□□□ -2.06
RAD9AQ99638 AC009238.1-201ENST00000442165 424 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.19□□□□□ -2.06
RAD9AQ99638 AC009237.6-201ENST00000446969 424 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RAD9AQ99638 GNAI2P1-201ENST00000541815 315 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 AC018630.3-201ENST00000542637 96 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 MIR4781-201ENST00000585250 76 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 AC007229.1-201ENST00000590455 412 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 AC243960.4-201ENST00000600532 288 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 AL078605.1-201ENST00000603529 500 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.19□□□□□ -2.06
RAD9AQ99638 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RAD9AQ99638 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.18□□□□□ -2.06
RAD9AQ99638 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAD9AQ99638 RNU4-15P-201ENST00000362613 141 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 RNU6-784P-201ENST00000384330 106 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RAD9AQ99638 U3.40-201ENST00000408706 208 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 AL139156.1-201ENST00000412785 841 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 RPL37P10-201ENST00000412884 288 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 MTND4LP11-201ENST00000422184 280 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 CBX3P6-201ENST00000430257 527 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 USP9YP30-201ENST00000430729 455 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 MTATP6P23-201ENST00000440153 476 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.18□□□□□ -2.06
RAD9AQ99638 MTND4P18-201ENST00000447010 465 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 Y_RNA.691-201ENST00000516611 103 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 RNU6-567P-201ENST00000516746 107 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 MRPS36P4-201ENST00000534436 298 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.18□□□□□ -2.06
RAD9AQ99638 FGF7P1-201ENST00000582820 288 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.18□□□□□ -2.06
RAD9AQ99638 Z98751.3-201ENST00000604447 521 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 AC063943.3-201ENST00000615562 356 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 AC092794.2-201ENST00000620933 563 ntBASIC2.18□□□□□ -2.06
RAD9AQ99638 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RAD9AQ99638 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RAD9AQ99638 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.18□□□□□ -2.06
RAD9AQ99638 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.17□□□□□ -2.06
RAD9AQ99638 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RAD9AQ99638 SNORD50.1-201ENST00000362987 71 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 RNU1-23P-201ENST00000363361 144 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 Y_RNA.142-201ENST00000363491 102 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 RNU6-1286P-201ENST00000383871 107 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 RNU6-546P-201ENST00000383991 107 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 RNU6-968P-201ENST00000384076 107 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 AL591034.2-201ENST00000402839 359 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 NCOR1P3-201ENST00000420479 303 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 MTND5P20-201ENST00000448677 143 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 AC091951.2-201ENST00000500762 203 ntBASIC2.17□□□□□ -2.06
RAD9AQ99638 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.17□□□□□ -2.06
RAD9AQ99638 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.17□□□□□ -2.06
RAD9AQ99638 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.17□□□□□ -2.06
RAD9AQ99638 MIR3126-201ENST00000577443 74 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms