Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HHIPQ96QV1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HHIPQ96QV1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
HHIPQ96QV1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HHIPQ96QV1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HHIPQ96QV1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HHIPQ96QV1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HHIPQ96QV1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HHIPQ96QV1 IPO8P1-201ENST00000455509 3109 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 SNORD114-7-201ENST00000362520 77 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 SNORD87-201ENST00000364849 89 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 MIR616-201ENST00000385293 97 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 MIR513C-201ENST00000401352 84 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 Z92545.1-201ENST00000411782 234 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 AC010099.1-201ENST00000455434 375 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 AC146507.2-201ENST00000460608 476 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 AC145146.1-201ENST00000496370 254 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 AC090616.3-201ENST00000582184 217 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.83□□□□□ -1.8
HHIPQ96QV1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HHIPQ96QV1 AP003122.5-201ENST00000527668 3766 ntBASIC3.83□□□□□ -1.8
HHIPQ96QV1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.82□□□□□ -1.8
HHIPQ96QV1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HHIPQ96QV1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HHIPQ96QV1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HHIPQ96QV1 AC069528.2-201ENST00000624849 1991 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HHIPQ96QV1 RNA5SP322-201ENST00000363617 119 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 RNA5SP205-201ENST00000364653 136 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 Y_RNA.337-201ENST00000365312 102 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 SNORA18.2-201ENST00000383865 132 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 RNU6-198P-201ENST00000384258 104 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 SNORA67.2-201ENST00000384300 149 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 AL133475.1-201ENST00000404414 305 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 SNORA11.2-201ENST00000408318 127 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.82□□□□□ -1.8
HHIPQ96QV1 RNU2-44P-201ENST00000516795 194 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 DEFB131C-201ENST00000528817 165 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.82□□□□□ -1.8
HHIPQ96QV1 uc_338.32-201ENST00000615087 172 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.82□□□□□ -1.8
HHIPQ96QV1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HHIPQ96QV1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HHIPQ96QV1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HHIPQ96QV1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HHIPQ96QV1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HHIPQ96QV1 snoU2_19.4-201ENST00000364329 80 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 Y_RNA.273-201ENST00000364703 102 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 Y_RNA.293-201ENST00000364908 93 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 RNU1-57P-201ENST00000384491 166 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 MIR490-201ENST00000384865 128 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 MIR199A2-201ENST00000385289 110 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 AL139281.1-201ENST00000422120 335 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.81□□□□□ -1.8
HHIPQ96QV1 BX510359.1-201ENST00000456973 237 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 RNA5SP164-201ENST00000516533 110 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.81□□□□□ -1.8
HHIPQ96QV1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.81□□□□□ -1.8
HHIPQ96QV1 AP000867.2-201ENST00000532468 320 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 AC022616.8-201ENST00000533569 253 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 AC109810.1-201ENST00000534066 224 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.81□□□□□ -1.8
HHIPQ96QV1 AL137843.1-201ENST00000605078 385 ntBASIC3.81□□□□□ -1.8
HHIPQ96QV1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
HHIPQ96QV1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HHIPQ96QV1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.81□□□□□ -1.8
HHIPQ96QV1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HHIPQ96QV1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HHIPQ96QV1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HHIPQ96QV1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.8□□□□□ -1.8
HHIPQ96QV1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
HHIPQ96QV1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.8□□□□□ -1.8
HHIPQ96QV1 Y_RNA.310-201ENST00000365063 113 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 Y_RNA.341-201ENST00000365341 102 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 MIR539-201ENST00000365690 78 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 RNU6-144P-201ENST00000383951 107 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 MIR3074-201ENST00000384885 81 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HHIPQ96QV1 RNU6-855P-201ENST00000410395 104 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 RNU2-49P-201ENST00000410666 184 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 RPL23AP58-201ENST00000440453 469 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.8□□□□□ -1.8
HHIPQ96QV1 RNU1-117P-201ENST00000517041 158 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.8□□□□□ -1.8
HHIPQ96QV1 AC020914.4-201ENST00000597690 277 ntBASIC3.8□□□□□ -1.8
HHIPQ96QV1 uc_338.14-201ENST00000613162 166 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms