Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AL137849.1-201ENST00000604767 169 ntBASIC4.12□□□□□ -1.75
CALR3Q96L12 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CALR3Q96L12 snoZ196.1-201ENST00000625269 89 ntBASIC4.12□□□□□ -1.75
CALR3Q96L12 AC021753.1-201ENST00000635724 168 ntBASIC4.12□□□□□ -1.75
CALR3Q96L12 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CALR3Q96L12 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CALR3Q96L12 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CALR3Q96L12 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CALR3Q96L12 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CALR3Q96L12 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CALR3Q96L12 RNU6-975P-201ENST00000384296 105 ntBASIC4.11□□□□□ -1.75
CALR3Q96L12 Y_RNA.506-201ENST00000384494 102 ntBASIC4.11□□□□□ -1.75
CALR3Q96L12 RNU6-125P-201ENST00000384505 107 ntBASIC4.11□□□□□ -1.75
CALR3Q96L12 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CALR3Q96L12 AC090515.1-201ENST00000465295 476 ntBASIC4.11□□□□□ -1.75
CALR3Q96L12 AC100767.1-201ENST00000528178 123 ntBASIC4.11□□□□□ -1.75
CALR3Q96L12 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.11□□□□□ -1.75
CALR3Q96L12 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.11□□□□□ -1.75
CALR3Q96L12 AC025754.2-201ENST00000606491 432 ntBASIC4.11□□□□□ -1.75
CALR3Q96L12 MIR5739-201ENST00000619803 80 ntBASIC4.11□□□□□ -1.75
CALR3Q96L12 AP000346.3-201ENST00000622821 210 ntBASIC4.11□□□□□ -1.75
CALR3Q96L12 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.11□□□□□ -1.75
CALR3Q96L12 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CALR3Q96L12 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CALR3Q96L12 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.11□□□□□ -1.75
CALR3Q96L12 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CALR3Q96L12 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.1□□□□□ -1.75
CALR3Q96L12 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CALR3Q96L12 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CALR3Q96L12 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CALR3Q96L12 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.1□□□□□ -1.75
CALR3Q96L12 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CALR3Q96L12 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.1□□□□□ -1.75
CALR3Q96L12 RNU6-899P-201ENST00000363947 107 ntBASIC4.1□□□□□ -1.75
CALR3Q96L12 Y_RNA.310-201ENST00000365063 113 ntBASIC4.1□□□□□ -1.75
CALR3Q96L12 AC080013.2-201ENST00000460866 323 ntBASIC4.1□□□□□ -1.75
CALR3Q96L12 RAC1P2-201ENST00000511164 579 ntBASIC4.1□□□□□ -1.75
CALR3Q96L12 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.1□□□□□ -1.75
CALR3Q96L12 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CALR3Q96L12 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.09□□□□□ -1.75
CALR3Q96L12 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CALR3Q96L12 AC080128.1-201ENST00000474389 1917 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 Y_RNA.238-201ENST00000364441 102 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 MTCO2P33-201ENST00000402100 465 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CALR3Q96L12 AL451074.5-201ENST00000415894 435 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 RNU6-221P-201ENST00000459541 99 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 RN7SKP83-201ENST00000516512 178 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 RNA5SP179-201ENST00000517284 121 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 AC093331.1-201ENST00000521474 169 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.09□□□□□ -1.75
CALR3Q96L12 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.09□□□□□ -1.75
CALR3Q96L12 AC091167.4-201ENST00000605079 184 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CALR3Q96L12 AL159152.1-201ENST00000635019 2587 ntBASIC4.09□□□□□ -1.75
CALR3Q96L12 AC009487.4-201ENST00000624969 3585 ntBASIC4.09□□□□□ -1.76
CALR3Q96L12 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CALR3Q96L12 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CALR3Q96L12 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.09□□□□□ -1.76
CALR3Q96L12 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.08□□□□□ -1.76
CALR3Q96L12 Y_RNA.121-201ENST00000363309 113 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 Y_RNA.170-201ENST00000363746 110 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 RNU6-187P-201ENST00000384139 106 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 SNORD14D-201ENST00000384390 87 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CALR3Q96L12 SNORA48.5-201ENST00000391143 135 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 MIR873-201ENST00000401120 77 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 AL355497.1-201ENST00000406262 551 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 RNU6-394P-201ENST00000410735 107 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.08□□□□□ -1.76
CALR3Q96L12 RPS20P10-201ENST00000451209 253 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 AC016925.1-201ENST00000458303 298 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 TRBV12-2-201ENST00000489763 344 ntBASIC4.08□□□□□ -1.76
CALR3Q96L12 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.08□□□□□ -1.76
CALR3Q96L12 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.08□□□□□ -1.76
CALR3Q96L12 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CALR3Q96L12 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.08□□□□□ -1.76
CALR3Q96L12 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
CALR3Q96L12 AC134026.1-201ENST00000623249 2239 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CALR3Q96L12 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CALR3Q96L12 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.07□□□□□ -1.76
CALR3Q96L12 MAPK10-362ENST00000641864 4484 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RNU6-1048P-201ENST00000364054 107 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RNU6-438P-201ENST00000365561 103 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 Y_RNA.441-201ENST00000384123 112 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 SNORA20B-201ENST00000384220 132 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CALR3Q96L12 FO393413.1-201ENST00000402892 195 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 AL355796.1-201ENST00000406706 323 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RNU2-2P-201ENST00000410396 191 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RNU6-57P-201ENST00000411348 103 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.07□□□□□ -1.76
CALR3Q96L12 CYP2C59P-201ENST00000457790 269 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 RPS4XP2-201ENST00000458402 793 ntBASIC4.07□□□□□ -1.76
CALR3Q96L12 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.07□□□□□ -1.76
CALR3Q96L12 CKS1BP2-201ENST00000497342 240 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms