Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RITA1Q96K30 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.59□□□□□ -1.99
RITA1Q96K30 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RITA1Q96K30 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RITA1Q96K30 AC000403.1-201ENST00000613696 3585 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
RITA1Q96K30 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RITA1Q96K30 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RITA1Q96K30 Y_RNA.65-201ENST00000362846 100 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 Y_RNA.331-201ENST00000365267 102 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 RNU6-1083P-201ENST00000384022 107 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 ELOCP21-201ENST00000412558 336 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.59□□□□□ -1.99
RITA1Q96K30 RPL23AP36-201ENST00000413895 458 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 RAB28P5-201ENST00000427490 651 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 Z98742.2-201ENST00000431564 187 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 SNORA64.4-201ENST00000516632 81 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.59□□□□□ -1.99
RITA1Q96K30 AC055872.1-201ENST00000570978 278 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 AC019176.2-201ENST00000611579 315 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 AC006001.4-201ENST00000622243 395 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.59□□□□□ -1.99
RITA1Q96K30 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.59□□□□□ -1.99
RITA1Q96K30 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
RITA1Q96K30 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
RITA1Q96K30 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RITA1Q96K30 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RITA1Q96K30 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.58□□□□□ -2
RITA1Q96K30 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RITA1Q96K30 SNORA25.1-201ENST00000362326 128 ntBASIC2.58□□□□□ -2
RITA1Q96K30 snoU2_19.1-201ENST00000362361 80 ntBASIC2.58□□□□□ -2
RITA1Q96K30 Y_RNA.44-201ENST00000362676 108 ntBASIC2.58□□□□□ -2
RITA1Q96K30 SNORD56.3-201ENST00000363507 71 ntBASIC2.58□□□□□ -2
RITA1Q96K30 Y_RNA.269-201ENST00000364685 89 ntBASIC2.58□□□□□ -2
RITA1Q96K30 SNORA72.2-201ENST00000365028 127 ntBASIC2.58□□□□□ -2
RITA1Q96K30 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RITA1Q96K30 Y_RNA.446-201ENST00000384178 104 ntBASIC2.58□□□□□ -2
RITA1Q96K30 Y_RNA.498-201ENST00000384460 102 ntBASIC2.58□□□□□ -2
RITA1Q96K30 RNVU1-14-201ENST00000384770 164 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AL357075.1-201ENST00000404107 726 ntBASIC2.58□□□□□ -2
RITA1Q96K30 SNORA11-201ENST00000408789 128 ntBASIC2.58□□□□□ -2
RITA1Q96K30 EIF4EP4-201ENST00000424916 578 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AC027124.2-201ENST00000428249 105 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AC005042.3-201ENST00000453230 174 ntBASIC2.58□□□□□ -2
RITA1Q96K30 RPL23AP3-201ENST00000453844 468 ntBASIC2.58□□□□□ -2
RITA1Q96K30 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.58□□□□□ -2
RITA1Q96K30 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.58□□□□□ -2
RITA1Q96K30 MRPS36P2-201ENST00000512569 299 ntBASIC2.58□□□□□ -2
RITA1Q96K30 Y_RNA.700-201ENST00000516806 100 ntBASIC2.58□□□□□ -2
RITA1Q96K30 DEFB131C-201ENST00000528817 165 ntBASIC2.58□□□□□ -2
RITA1Q96K30 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.58□□□□□ -2
RITA1Q96K30 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.58□□□□□ -2
RITA1Q96K30 AC130289.1-201ENST00000577321 73 ntBASIC2.58□□□□□ -2
RITA1Q96K30 MIR4643-201ENST00000577473 78 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AC103810.1-201ENST00000579873 453 ntBASIC2.58□□□□□ -2
RITA1Q96K30 MIR4765-201ENST00000585007 77 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AC008749.1-201ENST00000597650 306 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AC008739.3-201ENST00000603262 127 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AC022441.3-201ENST00000605737 136 ntBASIC2.58□□□□□ -2
RITA1Q96K30 TCL6_2.1-201ENST00000615162 119 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AL590240.4-201ENST00000616908 390 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AC012314.7-201ENST00000619693 93 ntBASIC2.58□□□□□ -2
RITA1Q96K30 MIR6075-201ENST00000620782 95 ntBASIC2.58□□□□□ -2
RITA1Q96K30 UCA1.1-201ENST00000620952 75 ntBASIC2.58□□□□□ -2
RITA1Q96K30 AC002064.3-201ENST00000623448 346 ntBASIC2.58□□□□□ -2
RITA1Q96K30 SNORA50A-202ENST00000629536 136 ntBASIC2.58□□□□□ -2
RITA1Q96K30 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
RITA1Q96K30 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.58□□□□□ -2
RITA1Q96K30 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.58□□□□□ -2
RITA1Q96K30 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RITA1Q96K30 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.58□□□□□ -2
RITA1Q96K30 AC091564.4-201ENST00000533934 2194 ntBASIC2.57□□□□□ -2
RITA1Q96K30 SNORA18.2-201ENST00000383865 132 ntBASIC2.57□□□□□ -2
RITA1Q96K30 Y_RNA.415-201ENST00000384012 112 ntBASIC2.57□□□□□ -2
RITA1Q96K30 Y_RNA.785-201ENST00000384290 109 ntBASIC2.57□□□□□ -2
RITA1Q96K30 MIR23B-201ENST00000384832 97 ntBASIC2.57□□□□□ -2
RITA1Q96K30 MIR548I3-201ENST00000408378 149 ntBASIC2.57□□□□□ -2
RITA1Q96K30 MIR548I1-201ENST00000408810 149 ntBASIC2.57□□□□□ -2
RITA1Q96K30 RPL19P1-201ENST00000411635 428 ntBASIC2.57□□□□□ -2
RITA1Q96K30 AC004866.1-201ENST00000411748 78 ntBASIC2.57□□□□□ -2
RITA1Q96K30 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.57□□□□□ -2
RITA1Q96K30 POLR2KP2-201ENST00000438155 177 ntBASIC2.57□□□□□ -2
RITA1Q96K30 AC004386.2-201ENST00000441858 148 ntBASIC2.57□□□□□ -2
RITA1Q96K30 PRSS3P4-201ENST00000453323 162 ntBASIC2.57□□□□□ -2
RITA1Q96K30 AC091179.1-201ENST00000461606 579 ntBASIC2.57□□□□□ -2
RITA1Q96K30 RNA5SP112-201ENST00000515937 99 ntBASIC2.57□□□□□ -2
RITA1Q96K30 SCARNA17.1-201ENST00000516211 143 ntBASIC2.57□□□□□ -2
RITA1Q96K30 SCARNA17.2-201ENST00000516334 143 ntBASIC2.57□□□□□ -2
RITA1Q96K30 RNU6-344P-201ENST00000516635 111 ntBASIC2.57□□□□□ -2
RITA1Q96K30 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.57□□□□□ -2
RITA1Q96K30 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.57□□□□□ -2
RITA1Q96K30 AC011471.1-201ENST00000585766 187 ntBASIC2.57□□□□□ -2
RITA1Q96K30 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.57□□□□□ -2
RITA1Q96K30 SCARNA17.4-201ENST00000614296 143 ntBASIC2.57□□□□□ -2
RITA1Q96K30 MAPK10-362ENST00000641864 4484 ntBASIC2.57□□□□□ -2
RITA1Q96K30 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
RITA1Q96K30 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.57□□□□□ -2
RITA1Q96K30 AC093908.1-201ENST00000623125 8092 ntBASIC2.57□□□□□ -2
RITA1Q96K30 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RITA1Q96K30 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms