Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MTND2P9-201ENST00000422293 931 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 Y_RNA.676-201ENST00000516393 96 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 RNU6-856P-201ENST00000516959 98 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 RNU6-430P-201ENST00000517078 107 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AC016256.1-201ENST00000547971 354 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 HIF1AP1-201ENST00000553642 175 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AC068790.2-201ENST00000602601 557 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 RNU6-85P-201ENST00000605989 107 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AC072046.2-201ENST00000618366 268 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AC095038.3-201ENST00000634439 195 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AL390237.1-201ENST00000404226 1415 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 RNU6-862P-201ENST00000362804 105 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 RNU6-1019P-201ENST00000364424 107 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 MIR548B-201ENST00000385247 97 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 ARL5AP1-201ENST00000418991 388 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 RPS27P16-201ENST00000425758 201 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AC027119.1-201ENST00000440877 241 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 OR2AQ1P-201ENST00000451972 200 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 RPL31P58-201ENST00000469001 379 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 MTND3P7-201ENST00000474435 343 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 RPS23P5-201ENST00000495419 428 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AC079140.3-201ENST00000511111 550 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AC067942.3-201ENST00000512025 362 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 TRMT112P2-201ENST00000512910 132 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 DEFB131C-201ENST00000528817 165 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AC005668.1-201ENST00000571142 476 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AL353149.1-201ENST00000610667 244 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AC083806.3-201ENST00000614016 455 ntBASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ECHDC3Q96DC8 RNU6-562P-201ENST00000362731 107 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 MIR194-1-201ENST00000384892 85 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 MIR208B-201ENST00000401172 77 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 FTH1P12-201ENST00000432137 551 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AL358934.1-201ENST00000432346 324 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AL121601.2-201ENST00000438019 707 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AC073415.1-201ENST00000449240 153 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 RPS29P27-201ENST00000463711 170 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 CCDC34P1-201ENST00000507441 517 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 HMGB1P33-201ENST00000563485 527 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AC090517.1-201ENST00000569307 266 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 MIR4424-201ENST00000585257 86 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 AP003465.2-201ENST00000602571 373 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 U2.17-201ENST00000611454 95 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 ICE2P2-201ENST00000483823 2787 ntBASIC1.2□□□□□ -2.22
ECHDC3Q96DC8 RNY1P10-201ENST00000363268 113 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 Y_RNA.164-201ENST00000363709 102 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 RNU6-1103P-201ENST00000384150 107 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 RNU7-138P-201ENST00000459479 64 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 RNA5SP481-201ENST00000516814 122 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 AC090821.2-201ENST00000523552 176 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 LRRC34P1-201ENST00000542742 915 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 AL391840.1-201ENST00000571144 367 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 AC015688.6-201ENST00000577737 104 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 HULC.1-201ENST00000612720 240 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 AC091931.1-201ENST00000623488 728 ntBASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.19□□□□□ -2.22
ECHDC3Q96DC8 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 RNU6-348P-201ENST00000384386 107 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 EBAG9P1-201ENST00000418955 543 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 AC060773.1-201ENST00000421698 310 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 MTCYBP8-201ENST00000422855 651 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 USP9YP28-201ENST00000435142 589 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 snoU13.30-201ENST00000458951 104 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 MIR3976-201ENST00000606807 139 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 AL355802.3-201ENST00000607571 545 ntBASIC1.18□□□□□ -2.22
ECHDC3Q96DC8 RNU1-96P-201ENST00000364163 162 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 RPS26P42-201ENST00000413485 326 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 MTND1P27-201ENST00000451117 902 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms