Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.35□□□□□ -2.03
SMARCE1Q969G3 MIR4273-201ENST00000582824 84 ntBASIC2.35□□□□□ -2.03
SMARCE1Q969G3 AC002984.1-201ENST00000591692 448 ntBASIC2.35□□□□□ -2.03
SMARCE1Q969G3 AC016727.1-205ENST00000605437 569 ntBASIC2.35□□□□□ -2.03
SMARCE1Q969G3 AP000654.2-201ENST00000605633 586 ntBASIC2.35□□□□□ -2.03
SMARCE1Q969G3 AC009229.3-201ENST00000608056 282 ntBASIC2.35□□□□□ -2.03
SMARCE1Q969G3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SMARCE1Q969G3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.35□□□□□ -2.03
SMARCE1Q969G3 MTND4P12-201ENST00000498999 1377 ntBASIC2.35□□□□□ -2.03
SMARCE1Q969G3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCE1Q969G3 Y_RNA.404-201ENST00000383978 102 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 RNU6-26P-201ENST00000383985 107 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 U8.10-201ENST00000384260 133 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 RNU6-611P-201ENST00000384276 104 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 AL355497.1-201ENST00000406262 551 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 U3.40-201ENST00000408706 208 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 RPS26P42-201ENST00000413485 326 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.34□□□□□ -2.03
SMARCE1Q969G3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCE1Q969G3 OR2AQ1P-201ENST00000451972 200 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 RNU6-1213P-201ENST00000517075 94 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 DEFB131C-201ENST00000528817 165 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCE1Q969G3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.34□□□□□ -2.03
SMARCE1Q969G3 AC090517.1-201ENST00000569307 266 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 MIR3126-201ENST00000577443 74 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 SNORD53-201ENST00000579969 78 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 AC016727.2-201ENST00000603988 621 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 AC099654.5-201ENST00000636479 350 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.34□□□□□ -2.03
SMARCE1Q969G3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.34□□□□□ -2.04
SMARCE1Q969G3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMARCE1Q969G3 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 RNU4-53P-201ENST00000410828 140 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 RNU6-1304P-201ENST00000411374 106 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.33□□□□□ -2.04
SMARCE1Q969G3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 MTND5P20-201ENST00000448677 143 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCE1Q969G3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 RPL30P10-201ENST00000488148 337 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.33□□□□□ -2.04
SMARCE1Q969G3 AC008413.1-201ENST00000511864 177 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 RNU6-277P-201ENST00000516272 106 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 RNA5SP384-201ENST00000516615 116 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 Y_RNA.708-201ENST00000516950 96 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.33□□□□□ -2.04
SMARCE1Q969G3 AC104260.1-201ENST00000616660 539 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.33□□□□□ -2.04
SMARCE1Q969G3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMARCE1Q969G3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMARCE1Q969G3 Y_RNA.2-201ENST00000362330 96 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 RNU6-234P-201ENST00000365229 104 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMARCE1Q969G3 MIR1262-201ENST00000408276 93 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCE1Q969G3 Y_RNA.635-201ENST00000459041 101 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.32□□□□□ -2.04
SMARCE1Q969G3 ATP5EP1-201ENST00000510257 156 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 RNU6-991P-201ENST00000516168 107 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 Y_RNA.702-201ENST00000516843 96 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 RNA5SP364-201ENST00000516938 78 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCE1Q969G3 AC098657.3-201ENST00000620434 263 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 uc_338.20-201ENST00000621563 178 ntBASIC2.32□□□□□ -2.04
SMARCE1Q969G3 ZNF299P-201ENST00000406845 1804 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 RNU6-595P-201ENST00000363944 107 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 RNU4-9P-201ENST00000364951 139 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 RNU6-331P-201ENST00000384724 107 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 MIR32-201ENST00000384965 70 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 RNU6-370P-201ENST00000411008 104 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 MTND4LP11-201ENST00000422184 280 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 MTCO3P29-201ENST00000432119 779 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 RPS27P21-201ENST00000486977 252 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 AL031274.2-201ENST00000599419 203 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 AL132765.2-201ENST00000610812 351 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
SMARCE1Q969G3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
SMARCE1Q969G3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SMARCE1Q969G3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMARCE1Q969G3 SNORA18.2-201ENST00000383865 132 ntBASIC2.3□□□□□ -2.04
SMARCE1Q969G3 MIR23A-201ENST00000385245 73 ntBASIC2.3□□□□□ -2.04
SMARCE1Q969G3 SNORA75.4-201ENST00000391278 119 ntBASIC2.3□□□□□ -2.04
SMARCE1Q969G3 SNORD23.1-201ENST00000408212 104 ntBASIC2.3□□□□□ -2.04
SMARCE1Q969G3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.3□□□□□ -2.04
SMARCE1Q969G3 NCOR1P3-201ENST00000420479 303 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms