Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MIR3671-201ENST00000580455 88 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 AC125232.2-201ENST00000592457 143 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 AL133393.1-201ENST00000603277 287 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 MIR8062-201ENST00000621515 85 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 AC130454.1-201ENST00000622948 401 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.84□□□□□ -1.96
ATG4AQ8WYN0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.183-201ENST00000363882 113 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 RNU6-851P-201ENST00000384565 107 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 Z92545.1-201ENST00000411782 234 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 WARS2P1-201ENST00000429678 537 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 AL139132.1-201ENST00000431587 344 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 AC112220.1-201ENST00000434628 355 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 RAC1P5-201ENST00000512182 576 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 RNY3P15-201ENST00000516297 97 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 AC005296.1-201ENST00000616145 209 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 MIR8057-201ENST00000620957 69 ntBASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
ATG4AQ8WYN0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.19-201ENST00000362462 99 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 RNA5SP361-201ENST00000362686 118 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 RNU6-1027P-201ENST00000383998 107 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 RNU6-281P-201ENST00000384212 103 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 MIR208B-201ENST00000401172 77 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 CBX3P9-201ENST00000402326 552 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 Z98742.2-201ENST00000431564 187 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 AC007215.1-201ENST00000464893 276 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 AC093023.1-201ENST00000547375 507 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 MIR4765-201ENST00000585007 77 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 AC011471.1-201ENST00000585766 187 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 AC078899.3-201ENST00000599065 212 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 AC006006.1-201ENST00000603082 144 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ATG4AQ8WYN0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.26-201ENST00000362539 101 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 RNU6-280P-201ENST00000364145 104 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.222-201ENST00000364264 102 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 RNU6-806P-201ENST00000365147 105 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.439-201ENST00000384119 94 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 SNORA26.7-201ENST00000391288 122 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 RNA5SP201-201ENST00000410316 124 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 AC097463.2-201ENST00000421074 142 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 RPS3P1-201ENST00000456781 192 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 RPL23AP70-201ENST00000483361 460 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 AC025465.3-201ENST00000510570 311 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.668-201ENST00000516233 93 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 RNU2-53P-201ENST00000516257 147 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 RN7SKP49-201ENST00000516675 260 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 AL356575.1-201ENST00000603008 283 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 AC005000.2-201ENST00000605468 310 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.772-201ENST00000606692 102 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 AC240442.1-201ENST00000616055 283 ntBASIC2.81□□□□□ -1.96
ATG4AQ8WYN0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 OR56A5-201ENST00000340110 738 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 RNU4-15P-201ENST00000362613 141 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.64-201ENST00000362845 102 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 RNU5F-3P-201ENST00000363767 117 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 RNU6-873P-201ENST00000363833 107 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.396-201ENST00000383949 103 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.461-201ENST00000384263 103 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 RNU6-1093P-201ENST00000391194 107 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 MRPL35P1-201ENST00000404272 572 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 SNORD12B-201ENST00000410433 91 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.618-201ENST00000410949 107 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 AL445305.1-201ENST00000432577 575 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 LINC01399-202ENST00000458450 244 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms