Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MIR92B-201ENST00000607575 96 ntBASIC3.34□□□□□ -1.87
ARHGEF39Q8N4T4 U4.6-201ENST00000621618 127 ntBASIC3.34□□□□□ -1.87
ARHGEF39Q8N4T4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
ARHGEF39Q8N4T4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ARHGEF39Q8N4T4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 Y_RNA.217-201ENST00000364214 105 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 MIR490-201ENST00000384865 128 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 COX6CP10-201ENST00000416832 224 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 Z75741.1-201ENST00000446793 314 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 SNORD2.1-201ENST00000458762 69 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 Y_RNA.641-201ENST00000459414 105 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 AC008155.2-201ENST00000464337 397 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 RNU2-12P-201ENST00000517216 168 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 AC087441.2-201ENST00000529141 262 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 AC026333.2-201ENST00000542164 106 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ARHGEF39Q8N4T4 AC068647.1-201ENST00000489539 2265 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-454P-201ENST00000364292 107 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 MIR218-2-201ENST00000385006 110 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 RNA5SP504-201ENST00000410676 117 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 YME1L1P1-201ENST00000429435 297 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 TOMM22P2-201ENST00000430735 237 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 AC026784.1-201ENST00000507986 352 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 RAC1P5-201ENST00000512182 576 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 AP005660.1-201ENST00000522972 293 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 AC072026.1-201ENST00000605023 201 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 AC011921.3-201ENST00000605540 361 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 snoU18.1-201ENST00000629629 71 ntBASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ARHGEF39Q8N4T4 AL355596.1-201ENST00000565399 3996 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-545P-201ENST00000362681 104 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 U3.8-201ENST00000363675 217 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-436P-201ENST00000516171 114 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 MIR7975-201ENST00000619350 68 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 AC002064.3-201ENST00000623448 346 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 U6.98-201ENST00000637157 84 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 AC091564.4-201ENST00000533934 2194 ntBASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ARHGEF39Q8N4T4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 RNU4-35P-201ENST00000362588 141 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 RNU1-33P-201ENST00000364249 162 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 SNORD32B-201ENST00000364460 84 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 Y_RNA.262-201ENST00000364641 102 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-47P-201ENST00000383866 107 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-211P-201ENST00000384047 107 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 SNORA40.19-201ENST00000390846 128 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 AC109925.1-201ENST00000478069 331 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 AC025518.1-201ENST00000479856 347 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 SRIP1-201ENST00000489235 288 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-861P-201ENST00000516745 106 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 AC022149.2-201ENST00000621061 203 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 AC091152.2-201ENST00000591628 2569 ntBASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ARHGEF39Q8N4T4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.29□□□□□ -1.88
ARHGEF39Q8N4T4 RNU6-923P-201ENST00000364753 107 ntBASIC3.29□□□□□ -1.88
ARHGEF39Q8N4T4 Y_RNA.308-201ENST00000365043 101 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms