Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 Y_RNA.688-201ENST00000516565 95 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 AC087683.1-201ENST00000591187 441 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 RN7SKP299-201ENST00000606679 301 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 U3.9-201ENST00000363823 204 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 SNORA36A-201ENST00000384221 132 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 SNORD37.1-201ENST00000390968 65 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 SNORA12.2-201ENST00000391040 156 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 AP000275.1-201ENST00000411943 390 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 MTCO2P3-201ENST00000442543 421 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 AC008628.2-201ENST00000502605 298 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 ATP5EP1-201ENST00000510257 156 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 RPL39P5-202ENST00000512505 151 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 SNORA14.1-201ENST00000516113 141 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 MIR3611-201ENST00000584484 83 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 Z98751.3-201ENST00000604447 521 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 AC097520.1-201ENST00000624435 385 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 SNORA43.4-201ENST00000629559 138 ntBASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CDKL3Q8IVW4 LINC02555-201ENST00000563933 1951 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 RNU6-378P-201ENST00000384324 107 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 RNU6-1106P-201ENST00000390845 107 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 RNU2-41P-201ENST00000410991 178 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC004965.1-201ENST00000413033 213 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 MTCO3P41-201ENST00000414801 328 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC009474.2-201ENST00000451383 136 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 TPTE2P5-203ENST00000458118 728 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 snoU13.9-201ENST00000458927 103 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 RNU1-131P-201ENST00000458943 161 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 MTCO3P38-201ENST00000468910 766 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 RNU6-189P-201ENST00000516120 101 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 RNU6-1038P-201ENST00000516516 104 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 SNORA31.17-201ENST00000516953 127 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC021231.3-201ENST00000558497 370 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 CYP4A27P-201ENST00000567218 190 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC010620.1-201ENST00000601088 1102 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC017083.3-201ENST00000609955 700 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC139792.3-201ENST00000623525 224 ntBASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDKL3Q8IVW4 AC245060.5-201ENST00000610778 3293 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 SNORD116-9-201ENST00000384000 95 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 RNU6-439P-201ENST00000384188 106 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 SNORD116-3-201ENST00000384287 95 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 RNU6-1119P-201ENST00000384349 108 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 SNORD116-7-201ENST00000384404 95 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 SNORD116-5-201ENST00000384462 95 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 MIR1287-201ENST00000408492 90 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AC123900.1-201ENST00000420390 96 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 MTCO1P44-201ENST00000441935 243 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 SNRPEP8-201ENST00000442866 260 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 RPL31P58-201ENST00000469001 379 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AC010409.1-201ENST00000487382 476 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 RNA5SP401-201ENST00000515920 127 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 RNU6-567P-201ENST00000516746 107 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AC090821.2-201ENST00000523552 176 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 CENPUP1-201ENST00000526649 1202 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AP003034.1-201ENST00000534621 422 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 SUB1P4-201ENST00000566062 339 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 MTND1P15-201ENST00000579262 949 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AP001330.5-201ENST00000607176 411 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDKL3Q8IVW4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AL391987.6-201ENST00000305671 199 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 RNU6-438P-201ENST00000365561 103 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 Y_RNA.409-201ENST00000383990 98 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 MIR208B-201ENST00000401172 77 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 AL663109.1-201ENST00000411498 844 ntBASIC1.26□□□□□ -2.21
CDKL3Q8IVW4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms