Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.61□□□□□ -1.99
HERC6Q8IVU3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.61□□□□□ -1.99
HERC6Q8IVU3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 AC022616.8-201ENST00000533569 253 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 MRPS36P4-201ENST00000534436 298 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 FRG2DP-202ENST00000566967 323 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 MIR5690-201ENST00000583739 73 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 MIR4658-201ENST00000584344 65 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 AL078605.1-201ENST00000603529 500 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 AL050343.2-201ENST00000607338 280 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.61□□□□□ -1.99
HERC6Q8IVU3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.6□□□□□ -1.99
HERC6Q8IVU3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HERC6Q8IVU3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.6□□□□□ -1.99
HERC6Q8IVU3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.11-201ENST00000362375 109 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.387-201ENST00000383918 102 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HERC6Q8IVU3 SNORA46.1-201ENST00000391069 153 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 MIR320B2-201ENST00000408479 138 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 RNA5SP201-201ENST00000410316 124 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 AC026782.1-201ENST00000512952 449 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.6□□□□□ -1.99
HERC6Q8IVU3 AP000654.2-201ENST00000605633 586 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 AL353997.5-201ENST00000618886 171 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 MIR1291-201ENST00000627649 87 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 MTND4LP32-201ENST00000636111 270 ntBASIC2.6□□□□□ -1.99
HERC6Q8IVU3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HERC6Q8IVU3 AC016717.2-201ENST00000609089 5141 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 SNORA25B-201ENST00000365507 128 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.394-201ENST00000383942 103 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 SNORD116-29-201ENST00000384516 83 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.594-201ENST00000410373 140 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 RPS26P42-201ENST00000413485 326 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 MTND4P28-201ENST00000426217 387 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 RN7SKP210-201ENST00000459176 261 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC087477.1-201ENST00000465747 340 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 RPL23AP75-201ENST00000491601 451 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC005741.1-201ENST00000511094 432 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 APOOP3-201ENST00000536787 586 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 MIR3126-201ENST00000577443 74 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 MIR5696-201ENST00000578474 85 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 AC011494.1-201ENST00000596454 237 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 MIR6873-201ENST00000622788 63 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 SCARNA4-201ENST00000629045 128 ntBASIC2.59□□□□□ -1.99
HERC6Q8IVU3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HERC6Q8IVU3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.59□□□□□ -2
HERC6Q8IVU3 ZNF299P-201ENST00000406845 1804 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.58□□□□□ -2
HERC6Q8IVU3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.58□□□□□ -2
HERC6Q8IVU3 RNU1-23P-201ENST00000363361 144 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 RNU6-944P-201ENST00000364023 107 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 RNU6-26P-201ENST00000383985 107 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 Y_RNA.473-201ENST00000384333 102 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 AF228730.4-201ENST00000421457 183 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 OR2AQ1P-201ENST00000451972 200 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 AC079354.2-201ENST00000453523 154 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 FO393415.2-201ENST00000480085 343 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 RNU7-175P-201ENST00000515915 61 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 RNU6-559P-201ENST00000516151 98 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 RNU6-1153P-201ENST00000516760 105 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.58□□□□□ -2
HERC6Q8IVU3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.58□□□□□ -2
HERC6Q8IVU3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.58□□□□□ -2
HERC6Q8IVU3 FO624990.1-201ENST00000636373 85 ntBASIC2.58□□□□□ -2
HERC6Q8IVU3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.58□□□□□ -2
HERC6Q8IVU3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.58□□□□□ -2
HERC6Q8IVU3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 RNU4-76P-201ENST00000364509 141 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 Y_RNA.259-201ENST00000364619 101 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 RNU6-611P-201ENST00000384276 104 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 RNU6-378P-201ENST00000384324 107 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.57□□□□□ -2
HERC6Q8IVU3 MTND1P14-201ENST00000427400 950 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 RPL23AP50-201ENST00000434149 455 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.57□□□□□ -2
HERC6Q8IVU3 SNORD19B-201ENST00000459623 84 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.57□□□□□ -2
HERC6Q8IVU3 RNA5SP458-201ENST00000516188 119 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 Y_RNA.718-201ENST00000517110 102 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.57□□□□□ -2
HERC6Q8IVU3 AC026271.5-201ENST00000577873 130 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 AL356055.1-201ENST00000602528 446 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 AC009229.3-201ENST00000608056 282 ntBASIC2.57□□□□□ -2
HERC6Q8IVU3 AC133104.2-201ENST00000615272 193 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms