Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AIMP1P2-201ENST00000425294 312 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.88□□□□□ -1.79
USP48Q86UV5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.88□□□□□ -1.79
USP48Q86UV5 AL136097.1-201ENST00000456945 913 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 RPS27P29-201ENST00000463110 252 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 RN7SL330P-201ENST00000469709 307 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 RNA5SP356-201ENST00000515972 94 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 RN7SKP40-201ENST00000517211 242 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 AC079598.5-201ENST00000547460 117 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 MIR4659A-201ENST00000580269 81 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 MIR4300-201ENST00000581016 96 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 UBL5P2-201ENST00000583788 219 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.88□□□□□ -1.79
USP48Q86UV5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.88□□□□□ -1.79
USP48Q86UV5 AC073476.4-201ENST00000628409 72 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP48Q86UV5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
USP48Q86UV5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
USP48Q86UV5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USP48Q86UV5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.88□□□□□ -1.79
USP48Q86UV5 RNU6-655P-201ENST00000362858 107 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 SNORD27-201ENST00000363981 72 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 RNU6-281P-201ENST00000384212 103 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 Y_RNA.462-201ENST00000384268 102 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 MTND5P15-201ENST00000434246 349 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 RN7SKP49-201ENST00000516675 260 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.87□□□□□ -1.79
USP48Q86UV5 AC005520.5-201ENST00000613926 164 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 AC092628.2-201ENST00000622492 339 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP48Q86UV5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.87□□□□□ -1.79
USP48Q86UV5 AL359854.1-201ENST00000614203 1594 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP48Q86UV5 AC091564.4-201ENST00000533934 2194 ntBASIC3.87□□□□□ -1.79
USP48Q86UV5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP48Q86UV5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.86□□□□□ -1.79
USP48Q86UV5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
USP48Q86UV5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP48Q86UV5 Y_RNA.16-201ENST00000362421 102 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 RNA5SP361-201ENST00000362686 118 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
USP48Q86UV5 Y_RNA.785-201ENST00000384290 109 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 MRPL35P1-201ENST00000404272 572 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 OOSP1P1-201ENST00000423265 274 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 ARF4P2-201ENST00000430209 526 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 AC007215.1-201ENST00000464893 276 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 GTF3AP2-201ENST00000557014 266 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.86□□□□□ -1.79
USP48Q86UV5 AC130289.1-201ENST00000577321 73 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.86□□□□□ -1.79
USP48Q86UV5 AC098479.1-201ENST00000609225 154 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.86□□□□□ -1.79
USP48Q86UV5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 UCA1.1-201ENST00000620952 75 ntBASIC3.86□□□□□ -1.79
USP48Q86UV5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
USP48Q86UV5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.86□□□□□ -1.79
USP48Q86UV5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP48Q86UV5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP48Q86UV5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP48Q86UV5 AL391987.6-201ENST00000305671 199 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 Y_RNA.117-201ENST00000363294 101 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 Y_RNA.143-201ENST00000363520 106 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 RNY1-201ENST00000364228 113 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 CBX3P9-201ENST00000402326 552 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 AL603910.2-201ENST00000407268 136 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 RNU2-20P-201ENST00000410425 191 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 SNORD12B-201ENST00000410433 91 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 RNU4-61P-201ENST00000411243 107 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 RNU6-1001P-201ENST00000411265 100 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 AL445305.1-201ENST00000432577 575 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.85□□□□□ -1.79
USP48Q86UV5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.85□□□□□ -1.79
USP48Q86UV5 AL139109.1-201ENST00000455491 297 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 AL121594.1-201ENST00000475906 575 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 DEFB108E-201ENST00000524692 240 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 MIR4643-201ENST00000577473 78 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.85□□□□□ -1.79
USP48Q86UV5 MIR3162-201ENST00000581818 82 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 AL356575.1-201ENST00000603008 283 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 MIR376A1-201ENST00000616574 68 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
USP48Q86UV5 AC093010.3-201ENST00000570269 15214 ntBASIC3.85□□□□□ -1.79
USP48Q86UV5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.85□□□□□ -1.79
USP48Q86UV5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP48Q86UV5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP48Q86UV5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP48Q86UV5 LINC02555-201ENST00000563933 1951 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.84□□□□□ -1.79
USP48Q86UV5 RNU1-70P-201ENST00000362618 164 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 RNU6-873P-201ENST00000363833 107 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 CD24P4-201ENST00000382840 243 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 RNU6-926P-201ENST00000384075 107 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 Y_RNA.541-201ENST00000384640 113 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 AL079342.1-201ENST00000401460 267 ntBASIC3.84□□□□□ -1.79
USP48Q86UV5 MIR320B2-201ENST00000408479 138 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms