Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU2-44P-201ENST00000516795 194 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 AC025281.1-201ENST00000567026 265 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF20Q5VTR2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.41□□□□□ -1.7
RNF20Q5VTR2 MIR4697-201ENST00000582977 78 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 HSPE1P7-201ENST00000604681 321 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 AC069200.1-201ENST00000609511 323 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF20Q5VTR2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF20Q5VTR2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF20Q5VTR2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF20Q5VTR2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RNF20Q5VTR2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF20Q5VTR2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF20Q5VTR2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF20Q5VTR2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RNF20Q5VTR2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF20Q5VTR2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RNF20Q5VTR2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF20Q5VTR2 RNU6-1205P-201ENST00000363625 106 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 U3.9-201ENST00000363823 204 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 Y_RNA.368-201ENST00000365547 113 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AL591034.1-201ENST00000407447 340 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 RN7SKP156-201ENST00000410308 342 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AL159169.1-201ENST00000421119 127 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 RPL23AP82-202ENST00000427528 469 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AC091390.1-201ENST00000433904 331 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AL133162.1-201ENST00000463228 453 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AC145146.1-201ENST00000496370 254 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.4□□□□□ -1.71
RNF20Q5VTR2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF20Q5VTR2 MIR5685-201ENST00000579080 79 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AC011603.4-201ENST00000611325 277 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AL391261.4-201ENST00000616012 481 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 AC068724.3-201ENST00000625906 87 ntBASIC4.4□□□□□ -1.71
RNF20Q5VTR2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF20Q5VTR2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF20Q5VTR2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF20Q5VTR2 RNU6-153P-201ENST00000364422 104 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 RNU2-49P-201ENST00000410666 184 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 AC006989.1-201ENST00000427212 131 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 NDUFB1P1-201ENST00000435191 180 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 RPS29P7-201ENST00000439662 171 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 HMGN2P16-201ENST00000456802 261 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 RNU6-561P-201ENST00000516222 102 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 RNA5SP309-201ENST00000516670 106 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 AC008011.1-201ENST00000545989 227 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 AC006133.1-201ENST00000617106 264 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 TUG1_4.1-201ENST00000619464 181 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 U6.115-201ENST00000636045 103 ntBASIC4.39□□□□□ -1.71
RNF20Q5VTR2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF20Q5VTR2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF20Q5VTR2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 ZNF702P-202ENST00000434269 1966 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNU1-75P-201ENST00000347264 129 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 Y_RNA.310-201ENST00000365063 113 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNU6-748P-201ENST00000384648 107 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 MIR15B-201ENST00000385045 98 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNU6-460P-201ENST00000391158 108 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNU2-52P-201ENST00000410680 190 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 SNORA57.3-201ENST00000411095 141 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 TOMM22P2-201ENST00000430735 237 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNU7-197P-201ENST00000458836 62 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNU4-57P-201ENST00000515980 135 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RN7SKP21-201ENST00000516503 220 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 HSPE1P18-201ENST00000517602 280 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 MIR3160-1-201ENST00000577972 85 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 LARP7P3-201ENST00000579888 337 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNU1-30P-201ENST00000606575 163 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 RNVU1-4-201ENST00000612985 164 ntBASIC4.38□□□□□ -1.71
RNF20Q5VTR2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF20Q5VTR2 AL136164.4-201ENST00000625013 2135 ntBASIC4.37□□□□□ -1.71
RNF20Q5VTR2 SNORD114-19-201ENST00000363072 75 ntBASIC4.37□□□□□ -1.71
RNF20Q5VTR2 Y_RNA.456-201ENST00000384232 111 ntBASIC4.37□□□□□ -1.71
RNF20Q5VTR2 AIMP1P2-201ENST00000425294 312 ntBASIC4.37□□□□□ -1.71
RNF20Q5VTR2 AC017083.1-201ENST00000428093 483 ntBASIC4.37□□□□□ -1.71
RNF20Q5VTR2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF20Q5VTR2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF20Q5VTR2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF20Q5VTR2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF20Q5VTR2 TNPO1P3-201ENST00000436471 2662 ntBASIC4.36□□□□□ -1.71
RNF20Q5VTR2 Y_RNA.229-201ENST00000364347 113 ntBASIC4.36□□□□□ -1.71
RNF20Q5VTR2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RNF20Q5VTR2 RNU6-643P-201ENST00000384018 107 ntBASIC4.36□□□□□ -1.71
RNF20Q5VTR2 MIR526A2-201ENST00000390198 65 ntBASIC4.36□□□□□ -1.71
RNF20Q5VTR2 AL606845.1-201ENST00000404881 255 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms