Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC009237.7-201ENST00000447357 229 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 U8.22-201ENST00000459141 133 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.75□□□□□ -1.97
RNF220Q5VTB9 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 RNU6-1098P-201ENST00000516772 96 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 GNAI2P1-201ENST00000541815 315 ntBASIC2.75□□□□□ -1.97
RNF220Q5VTB9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.75□□□□□ -1.97
RNF220Q5VTB9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RNF220Q5VTB9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RNF220Q5VTB9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RNF220Q5VTB9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF220Q5VTB9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RNF220Q5VTB9 RNU1-62P-201ENST00000362599 164 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 RNU6-879P-201ENST00000364328 108 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 SNORA22B-201ENST00000383876 138 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 RNVU1-14-201ENST00000384770 164 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 MTCO3P19-201ENST00000415864 321 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 CHEK2P4-201ENST00000450340 246 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 RNU7-14P-201ENST00000459331 62 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 AC074250.1-201ENST00000511117 192 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 RNU6-667P-201ENST00000517186 102 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RNF220Q5VTB9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.74□□□□□ -1.97
RNF220Q5VTB9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
RNF220Q5VTB9 AC093023.1-201ENST00000547375 507 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 ANP32BP3-201ENST00000559213 706 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 AC006600.1-201ENST00000572529 153 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 AC010999.1-201ENST00000611856 324 ntBASIC2.74□□□□□ -1.97
RNF220Q5VTB9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RNF220Q5VTB9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 Y_RNA.179-201ENST00000363844 90 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 DEFA7P-201ENST00000382676 285 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 MIR34B-201ENST00000385076 84 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 AL357139.1-201ENST00000407792 426 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 RN7SL504P-201ENST00000494496 287 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 RNU6-475P-201ENST00000516073 104 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 SNORA40.14-201ENST00000516543 86 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 RNU6-344P-201ENST00000516635 111 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 AC034114.1-201ENST00000520293 285 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 MIR4658-201ENST00000584344 65 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
RNF220Q5VTB9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF220Q5VTB9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF220Q5VTB9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF220Q5VTB9 SNORA63-201ENST00000363450 132 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 Y_RNA.148-201ENST00000363557 117 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 RNU6-743P-201ENST00000364151 106 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 Y_RNA.216-201ENST00000364205 93 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 RNU6-793P-201ENST00000384233 104 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 RNU6-1026P-201ENST00000384465 108 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF220Q5VTB9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF220Q5VTB9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF220Q5VTB9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF220Q5VTB9 CYCSP26-201ENST00000534107 320 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 AL442163.3-201ENST00000554110 156 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 HSBP1P1-201ENST00000555205 166 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 YPEL5P2-201ENST00000605553 359 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 AC090115.4-201ENST00000609970 188 ntBASIC2.72□□□□□ -1.97
RNF220Q5VTB9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF220Q5VTB9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF220Q5VTB9 AC005592.1-201ENST00000566527 1640 ntBASIC2.71□□□□□ -1.97
RNF220Q5VTB9 ZNF271P-202ENST00000465539 1970 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.71□□□□□ -1.98
RNF220Q5VTB9 RNU6-1301P-201ENST00000362724 104 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 Y_RNA.132-201ENST00000363421 102 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 SNORA71.1-201ENST00000364523 117 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 AC117470.1-201ENST00000381974 330 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF220Q5VTB9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.71□□□□□ -1.98
RNF220Q5VTB9 AL160004.2-201ENST00000432935 350 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF220Q5VTB9 HMGN2P18-201ENST00000450680 270 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 AC008885.1-201ENST00000514930 301 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 CYCSP23-201ENST00000519781 313 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 AP002770.2-201ENST00000543613 532 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 MIR5188-201ENST00000583467 113 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 AC125232.2-201ENST00000592457 143 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 SNORD58B-201ENST00000607313 66 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.71□□□□□ -1.98
RNF220Q5VTB9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RNF220Q5VTB9 ZNF72P-201ENST00000425869 1908 ntBASIC2.71□□□□□ -1.98
RNF220Q5VTB9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RNF220Q5VTB9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.7□□□□□ -1.98
RNF220Q5VTB9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RNF220Q5VTB9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms