Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC012005.1-201ENST00000624575 75 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 AL136360.1-201ENST00000503377 1900 ntBASIC3.8□□□□□ -1.8
RSPO4Q2I0M5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 RNA5SP496-201ENST00000391240 109 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 HDGFP1-201ENST00000405943 252 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 Y_RNA.593-201ENST00000410292 98 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 RNA5SP136-201ENST00000410906 107 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 RN7SKP101-201ENST00000411376 320 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 AC019205.3-201ENST00000424573 156 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 AC005300.1-201ENST00000428401 373 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 AC005326.1-201ENST00000429197 123 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 AC107297.1-201ENST00000459991 176 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 AC025518.1-201ENST00000479856 347 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 AC139453.2-201ENST00000487255 133 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 RNU6-1299P-201ENST00000516316 100 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 YPEL5P3-201ENST00000547227 352 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 AC136601.2-201ENST00000604356 474 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 AC090132.2-201ENST00000615881 347 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RSPO4Q2I0M5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 RNA5SP126-201ENST00000365092 109 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 COTL1P1-201ENST00000422309 375 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 TOMM22P2-201ENST00000430735 237 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 CKS1BP5-201ENST00000434172 273 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 MTATP6P21-201ENST00000440681 189 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 SNORA31.23-201ENST00000517219 133 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 CKS1BP7-201ENST00000522230 235 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 FAM71BP1-201ENST00000604431 523 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 YPEL5P2-201ENST00000605553 359 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 SNORD11B-201ENST00000607707 90 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 AL138880.2-201ENST00000616214 239 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 BMS1P21-201ENST00000634565 365 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 MIR3529-201ENST00000637713 78 ntBASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.78□□□□□ -1.8
RSPO4Q2I0M5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AC027290.2-201ENST00000623210 18662 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 RNU1-100P-201ENST00000365255 165 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 Y_RNA.342-201ENST00000365352 113 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 MIR208B-201ENST00000401172 77 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 MIR891A-201ENST00000401237 79 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 SNORA19.1-201ENST00000410656 129 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AC008134.1-201ENST00000420943 193 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 RPL27AP8-201ENST00000424277 446 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AC073261.1-201ENST00000429409 121 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AC008155.2-201ENST00000464337 397 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 MLLT10P2-201ENST00000506434 249 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 RNA5SP490-201ENST00000517141 136 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 MIR4458-201ENST00000578872 75 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AL162713.1-201ENST00000604480 262 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AP003357.1-201ENST00000604497 148 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AC068205.3-201ENST00000636385 468 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 AL513302.2-201ENST00000562313 1842 ntBASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.77□□□□□ -1.81
RSPO4Q2I0M5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.76□□□□□ -1.81
RSPO4Q2I0M5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RSPO4Q2I0M5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.76□□□□□ -1.81
RSPO4Q2I0M5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
RSPO4Q2I0M5 AP002088.1-201ENST00000382740 395 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms