Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 RNU6-1098P-201ENST00000516772 96 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AP003034.1-201ENST00000534621 422 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.3□□□□□ -2.2
CDH17Q12864 SUB1P3-201ENST00000564581 315 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 CYP4A27P-201ENST00000567218 190 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 snoU13.31-201ENST00000607291 104 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 AC005520.5-201ENST00000613926 164 ntBASIC1.3□□□□□ -2.2
CDH17Q12864 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
CDH17Q12864 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.3□□□□□ -2.2
CDH17Q12864 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 SNORA32.2-201ENST00000384049 122 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AF228730.1-201ENST00000397972 663 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AL606923.1-201ENST00000406616 190 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.29□□□□□ -2.2
CDH17Q12864 TPT1P7-201ENST00000458300 517 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 MTCO3P38-201ENST00000468910 766 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH17Q12864 Y_RNA.673-201ENST00000516306 88 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 SNORA40.12-201ENST00000516329 111 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AC026407.1-201ENST00000518369 204 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AC021231.3-201ENST00000558497 370 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH17Q12864 AC006362.1-201ENST00000567392 174 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
CDH17Q12864 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 AC017083.3-201ENST00000609955 700 ntBASIC1.29□□□□□ -2.2
CDH17Q12864 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.29□□□□□ -2.2
CDH17Q12864 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.29□□□□□ -2.2
CDH17Q12864 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDH17Q12864 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDH17Q12864 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CDH17Q12864 MIR337-201ENST00000362281 93 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 RNU6-112P-201ENST00000363599 104 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 RNU6-271P-201ENST00000363858 105 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 Y_RNA.296-201ENST00000364930 108 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 SNORD26-201ENST00000384147 75 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 Y_RNA.582-201ENST00000391023 95 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 DEFB108C-201ENST00000400154 252 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 BTF3P4-201ENST00000418852 495 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 AC012306.1-201ENST00000423267 114 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH17Q12864 RNU7-95P-201ENST00000459222 64 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 AC099513.1-201ENST00000490423 301 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 RNU6-567P-201ENST00000516746 107 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.28□□□□□ -2.2
CDH17Q12864 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.28□□□□□ -2.2
CDH17Q12864 AC009994.1-201ENST00000606889 253 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.28□□□□□ -2.2
CDH17Q12864 AC090582.1-201ENST00000636321 199 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 MTND5P9-201ENST00000503854 1755 ntBASIC1.28□□□□□ -2.2
CDH17Q12864 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.27□□□□□ -2.21
CDH17Q12864 RNU1-76P-201ENST00000362903 159 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 SNORD31B-201ENST00000364977 69 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 RNU6-438P-201ENST00000365561 103 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 MIR208B-201ENST00000401172 77 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH17Q12864 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH17Q12864 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 MTCO2P16-201ENST00000436962 677 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH17Q12864 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 TPTE2P5-203ENST00000458118 728 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 RPS29P27-201ENST00000463711 170 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH17Q12864 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH17Q12864 AC097473.1-201ENST00000508142 408 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 RNU5F-4P-201ENST00000516581 114 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 RNU6-323P-201ENST00000521915 107 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.27□□□□□ -2.21
CDH17Q12864 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH17Q12864 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH17Q12864 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.27□□□□□ -2.21
CDH17Q12864 AC090517.1-201ENST00000569307 266 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 MIR5094-201ENST00000578766 85 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 AC103705.1-201ENST00000619013 241 ntBASIC1.27□□□□□ -2.21
CDH17Q12864 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.27□□□□□ -2.21
CDH17Q12864 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDH17Q12864 RNU6-82P-201ENST00000363970 107 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 RNU6-38P-201ENST00000384085 107 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH17Q12864 RNU4-55P-201ENST00000410731 137 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 EBAG9P1-201ENST00000418955 543 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 FTH1P12-201ENST00000432137 551 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 UBE2V1P8-201ENST00000437166 265 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.26□□□□□ -2.21
CDH17Q12864 AC009474.2-201ENST00000451383 136 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 AC016925.1-201ENST00000458303 298 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 RNU7-14P-201ENST00000459331 62 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 RNU6-1037P-201ENST00000459571 107 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 RPS26P55-201ENST00000471178 356 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 RNU6-189P-201ENST00000516120 101 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 RNU6-1038P-201ENST00000516516 104 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 Y_RNA.688-201ENST00000516565 95 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 RNU6-1069P-201ENST00000516612 133 ntBASIC1.26□□□□□ -2.21
CDH17Q12864 RNU6-612P-201ENST00000516909 102 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms