Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 AC023141.11-201ENST00000508864 202 ntBASIC3.72□□□□□ -1.81
HDLBPQ00341 AC074133.1-201ENST00000515696 183 ntBASIC3.72□□□□□ -1.81
HDLBPQ00341 RNU6-586P-201ENST00000517265 104 ntBASIC3.72□□□□□ -1.81
HDLBPQ00341 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.72□□□□□ -1.81
HDLBPQ00341 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.72□□□□□ -1.81
HDLBPQ00341 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.72□□□□□ -1.81
HDLBPQ00341 AC073476.4-201ENST00000628409 72 ntBASIC3.72□□□□□ -1.81
HDLBPQ00341 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.72□□□□□ -1.81
HDLBPQ00341 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.72□□□□□ -1.81
HDLBPQ00341 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
HDLBPQ00341 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.71□□□□□ -1.82
HDLBPQ00341 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HDLBPQ00341 MTND5P35-201ENST00000557537 1720 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 Y_RNA.19-201ENST00000362462 99 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 RNU6-702P-201ENST00000364982 107 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 RNU6-1328P-201ENST00000410938 106 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 ELOCP20-201ENST00000422460 345 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 AC027124.2-201ENST00000428249 105 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.71□□□□□ -1.82
HDLBPQ00341 AL445305.1-201ENST00000432577 575 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 PCNPP5-201ENST00000452246 481 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 SNORA31.26-201ENST00000517250 137 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 MIR4503-201ENST00000582187 83 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HDLBPQ00341 AC080128.1-201ENST00000474389 1917 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 PWAR6-201ENST00000552334 4618 ntBASIC3.71□□□□□ -1.82
HDLBPQ00341 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HDLBPQ00341 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HDLBPQ00341 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HDLBPQ00341 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HDLBPQ00341 MIR22-201ENST00000362190 85 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 Y_RNA.193-201ENST00000363979 102 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 RNA5SP240-201ENST00000365355 128 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 MIR568-201ENST00000385036 95 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 MIR1294-201ENST00000408503 142 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.7□□□□□ -1.82
HDLBPQ00341 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.7□□□□□ -1.82
HDLBPQ00341 AL139132.1-201ENST00000431587 344 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 AC025750.2-201ENST00000442609 450 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.7□□□□□ -1.82
HDLBPQ00341 RNU6-344P-201ENST00000516635 111 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 AL449363.1-201ENST00000617815 186 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 MIR8062-201ENST00000621515 85 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 LINC02555-201ENST00000563933 1951 ntBASIC3.7□□□□□ -1.82
HDLBPQ00341 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HDLBPQ00341 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.7□□□□□ -1.82
HDLBPQ00341 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HDLBPQ00341 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.69□□□□□ -1.82
HDLBPQ00341 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HDLBPQ00341 RNU6-926P-201ENST00000384075 107 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 Y_RNA.597-201ENST00000410463 100 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 AC010095.1-201ENST00000443543 144 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 AC009237.7-201ENST00000447357 229 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 UQCRBP2-201ENST00000447827 297 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 AC146507.2-201ENST00000460608 476 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 AC083906.5-201ENST00000503722 328 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 RPL23AP94-201ENST00000512518 302 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.69□□□□□ -1.82
HDLBPQ00341 MYL12BP1-201ENST00000569826 507 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 MIR5006-201ENST00000583027 110 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 MIR4298-201ENST00000584380 73 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 AL713866.2-201ENST00000603579 219 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 MIR376A1-201ENST00000616574 68 ntBASIC3.69□□□□□ -1.82
HDLBPQ00341 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.69□□□□□ -1.82
HDLBPQ00341 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.69□□□□□ -1.82
HDLBPQ00341 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HDLBPQ00341 Z82209.1-201ENST00000422141 2135 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HDLBPQ00341 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HDLBPQ00341 RNU1-75P-201ENST00000347264 129 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 SNORD32B-201ENST00000364460 84 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 Y_RNA.462-201ENST00000384268 102 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 AL079342.1-201ENST00000401460 267 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 MIR1302-6-201ENST00000408466 90 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 RNA5SP293-201ENST00000410527 113 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 RNU2-63P-201ENST00000410792 194 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 RNU6-130P-201ENST00000411112 103 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HDLBPQ00341 AL390729.2-201ENST00000416137 156 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 AL513477.1-202ENST00000417061 214 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.68□□□□□ -1.82
HDLBPQ00341 AC004386.2-201ENST00000441858 148 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 IFNA11P-201ENST00000446352 526 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 RPS27P29-201ENST00000463110 252 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 AC025465.3-201ENST00000510570 311 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 SNORA40.9-201ENST00000515895 93 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.68□□□□□ -1.82
HDLBPQ00341 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.68□□□□□ -1.82
HDLBPQ00341 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.68□□□□□ -1.82
HDLBPQ00341 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HDLBPQ00341 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.68□□□□□ -1.82
HDLBPQ00341 SNORD11B-201ENST00000607707 90 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.68□□□□□ -1.82
HDLBPQ00341 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.68□□□□□ -1.82
HDLBPQ00341 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HDLBPQ00341 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HDLBPQ00341 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.67□□□□□ -1.82
HDLBPQ00341 SNORA18.2-201ENST00000383865 132 ntBASIC3.67□□□□□ -1.82
HDLBPQ00341 RNU6-26P-201ENST00000383985 107 ntBASIC3.67□□□□□ -1.82
HDLBPQ00341 FO393413.1-201ENST00000402892 195 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms