Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-700P-201ENST00000391043 107 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 RNA5SP184-201ENST00000411071 108 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 MTCYBP10-201ENST00000424905 650 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 MTND3P23-201ENST00000431980 347 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 AL445305.1-201ENST00000432577 575 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 AL035666.1-201ENST00000446195 348 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 RPL17P19-201ENST00000489069 552 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 RNA5SP356-201ENST00000515972 94 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 RNU6-58P-201ENST00000517143 103 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.05□□□□□ -2.08
CX3CL1P78423 PRELID2P1-201ENST00000552837 301 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 AC233702.2-202ENST00000562547 291 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 AC004584.2-201ENST00000570407 410 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.05□□□□□ -2.08
CX3CL1P78423 AC100812.1-201ENST00000607622 580 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 AC126177.8-201ENST00000618339 1015 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CX3CL1P78423 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CX3CL1P78423 ZNF204P-201ENST00000416749 2397 ntBASIC2.05□□□□□ -2.08
CX3CL1P78423 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CX3CL1P78423 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
CX3CL1P78423 AC080100.1-201ENST00000624239 5356 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CX3CL1P78423 RNU6-874P-201ENST00000362390 105 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 RNU6-222P-201ENST00000362438 107 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 SNORA3A-201ENST00000364113 130 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 MIR196B-201ENST00000384852 84 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 AC004866.1-201ENST00000411748 78 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 AC007064.1-201ENST00000412238 351 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 EDDM3CP-201ENST00000415977 425 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 BX322639.1-202ENST00000423987 2213 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.04□□□□□ -2.08
CX3CL1P78423 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CX3CL1P78423 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.04□□□□□ -2.08
CX3CL1P78423 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.04□□□□□ -2.08
CX3CL1P78423 PRELID3BP1-201ENST00000457142 540 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 AP000870.1-201ENST00000472927 406 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.04□□□□□ -2.08
CX3CL1P78423 ATP5EP1-201ENST00000510257 156 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.04□□□□□ -2.08
CX3CL1P78423 AC008549.1-201ENST00000512900 643 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.04□□□□□ -2.08
CX3CL1P78423 SNORA31.11-201ENST00000516528 139 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 RNU5F-4P-201ENST00000516581 114 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.04□□□□□ -2.08
CX3CL1P78423 MIR4319-201ENST00000577285 85 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 RPL17P51-201ENST00000605218 238 ntBASIC2.04□□□□□ -2.08
CX3CL1P78423 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
CX3CL1P78423 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CX3CL1P78423 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
CX3CL1P78423 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CL1P78423 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CL1P78423 Y_RNA.61-201ENST00000362835 102 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 RNU6-99P-201ENST00000364721 107 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 RNU6-541P-201ENST00000384709 110 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 MIR559-201ENST00000385188 96 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CX3CL1P78423 MIR190B-201ENST00000401119 79 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 AL357139.1-201ENST00000407792 426 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CL1P78423 AC092423.1-201ENST00000430165 186 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 AC004386.2-201ENST00000441858 148 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CL1P78423 MTCO3P8-201ENST00000453691 755 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.03□□□□□ -2.08
CX3CL1P78423 RNU6-470P-201ENST00000515954 104 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 RNA5SP54-201ENST00000516951 92 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 RNA5SP490-201ENST00000517141 136 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.03□□□□□ -2.08
CX3CL1P78423 UBL5P4-201ENST00000562584 236 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 SUB1P3-201ENST00000564581 315 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 MIR3126-201ENST00000577443 74 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 MIR5092-201ENST00000583139 88 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 SNRPGP17-201ENST00000603780 214 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.03□□□□□ -2.08
CX3CL1P78423 AL137847.3-201ENST00000611521 109 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 TCL6_2.1-201ENST00000615162 119 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.03□□□□□ -2.08
CX3CL1P78423 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.03□□□□□ -2.08
CX3CL1P78423 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.03□□□□□ -2.08
CX3CL1P78423 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CL1P78423 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CL1P78423 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CL1P78423 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CX3CL1P78423 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CX3CL1P78423 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CX3CL1P78423 AC062016.1-201ENST00000355719 319 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 Y_RNA.106-201ENST00000363189 100 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU6-137P-201ENST00000363680 108 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU6-873P-201ENST00000363833 107 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU6-1040P-201ENST00000383974 107 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 MIR1262-201ENST00000408276 93 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 AC007098.1-201ENST00000420122 367 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.02□□□□□ -2.09
CX3CL1P78423 HMGN2P18-201ENST00000450680 270 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 AL137159.1-201ENST00000452808 512 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 AL139109.1-201ENST00000455491 297 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 MIR2053-201ENST00000459295 91 ntBASIC2.02□□□□□ -2.09
CX3CL1P78423 RNU7-14P-201ENST00000459331 62 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms