Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 RNU6-1140P-201ENST00000410517 106 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 COX6CP10-201ENST00000416832 224 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AC078809.1-201ENST00000427601 140 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.43□□□□□ -1.86
NKX3-2P78367 AC083906.5-201ENST00000503722 328 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 RNA5SP367-201ENST00000516557 118 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX3-2P78367 AC022559.1-201ENST00000520905 205 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.43□□□□□ -1.86
NKX3-2P78367 GTF3AP2-201ENST00000557014 266 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AC021231.3-201ENST00000558497 370 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AC055872.1-201ENST00000570978 278 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AC090897.2-201ENST00000581715 130 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 HSPE1P7-201ENST00000604681 321 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AC011921.3-201ENST00000605540 361 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 AC073476.4-201ENST00000628409 72 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
NKX3-2P78367 AC004944.1-201ENST00000517807 3059 ntBASIC3.43□□□□□ -1.86
NKX3-2P78367 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NKX3-2P78367 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.43□□□□□ -1.86
NKX3-2P78367 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NKX3-2P78367 SNORA25.1-201ENST00000362326 128 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 RNU6-1159P-201ENST00000362933 107 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 RNU6-746P-201ENST00000384112 109 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 Y_RNA.464-201ENST00000384282 110 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 RNU6-851P-201ENST00000384565 107 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 RNU1-101P-201ENST00000391171 127 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX3-2P78367 MRPS10P1-201ENST00000448483 130 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 AC012308.1-201ENST00000451232 178 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX3-2P78367 AC074198.2-201ENST00000508153 258 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 SNORA25.14-201ENST00000516481 132 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 RNU6-789P-201ENST00000517105 102 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.42□□□□□ -1.86
NKX3-2P78367 RPL21P9-201ENST00000556149 474 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX3-2P78367 AC037487.3-201ENST00000606668 112 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 AC073308.1-201ENST00000623696 305 ntBASIC3.42□□□□□ -1.86
NKX3-2P78367 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX3-2P78367 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX3-2P78367 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
NKX3-2P78367 AC092435.3-201ENST00000565538 3654 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX3-2P78367 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX3-2P78367 AC073325.2-201ENST00000339545 159 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 AC092268.1-201ENST00000342691 405 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 Y_RNA.275-201ENST00000364726 110 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 RNA5SP126-201ENST00000365092 109 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 RNU6-301P-201ENST00000384277 107 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 SNORA26.3-201ENST00000391119 136 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 RPL19P1-201ENST00000411635 428 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 AC012306.1-201ENST00000423267 114 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX3-2P78367 AL392103.1-201ENST00000447000 198 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX3-2P78367 NDUFB4P10-201ENST00000452541 359 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 snoU13.28-201ENST00000459235 104 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 AC091959.1-201ENST00000495857 238 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 RNU5F-8P-201ENST00000515941 111 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 RNU6-966P-201ENST00000516479 104 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 Y_RNA.683-201ENST00000516508 93 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 RNU6-861P-201ENST00000516745 106 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 RNU6-1198P-201ENST00000516904 67 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 MIR3133-201ENST00000583157 78 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX3-2P78367 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX3-2P78367 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.41□□□□□ -1.86
NKX3-2P78367 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX3-2P78367 CUL1P1-201ENST00000509510 2425 ntBASIC3.41□□□□□ -1.86
NKX3-2P78367 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX3-2P78367 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NKX3-2P78367 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NKX3-2P78367 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NKX3-2P78367 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.87
NKX3-2P78367 MIR410-201ENST00000362222 80 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 Y_RNA.331-201ENST00000365267 102 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 SNORA19-201ENST00000384737 128 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NKX3-2P78367 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX3-2P78367 Y_RNA.590-201ENST00000410140 107 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 RNA5SP390-201ENST00000410191 113 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 RNU2-61P-201ENST00000411069 191 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 AC019205.3-201ENST00000424573 156 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 MTCO1P5-201ENST00000433573 344 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX3-2P78367 AC009237.7-201ENST00000447357 229 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX3-2P78367 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX3-2P78367 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX3-2P78367 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX3-2P78367 MIR3609-201ENST00000582661 80 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 MIR4282-201ENST00000583613 67 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 AC005176.2-201ENST00000596933 147 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 MZT1P2-201ENST00000604387 248 ntBASIC3.4□□□□□ -1.87
NKX3-2P78367 AC010999.1-201ENST00000611856 324 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms