Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC018659.1-201ENST00000551083 169 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 AC012557.2-201ENST00000605919 418 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 ELL2P3-201ENST00000457883 1602 ntBASIC0.35□□□□□ -2.35
HIST1H3AP68431 Y_RNA.504-201ENST00000384481 104 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 RNU6-1235P-201ENST00000384559 107 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 RN7SKP200-201ENST00000410564 320 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H3AP68431 AC092423.1-201ENST00000430165 186 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 AL606517.2-201ENST00000442855 241 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 SNRPGP9-201ENST00000456025 225 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 RNU6-498P-201ENST00000459468 107 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 SRRM1P2-201ENST00000464531 1192 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 RNU6-229P-201ENST00000516614 102 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 RNU6-1223P-201ENST00000517124 104 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.34□□□□□ -2.36
HIST1H3AP68431 AC009994.1-201ENST00000606889 253 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.34□□□□□ -2.36
HIST1H3AP68431 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
HIST1H3AP68431 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.34□□□□□ -2.36
HIST1H3AP68431 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.34□□□□□ -2.36
HIST1H3AP68431 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
HIST1H3AP68431 RNU4-76P-201ENST00000364509 141 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 RNU1-133P-201ENST00000364867 167 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 Y_RNA.324-201ENST00000365165 102 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 RNU6-61P-201ENST00000365528 109 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 AL133396.1-201ENST00000432048 687 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 FABP5P4-201ENST00000437203 171 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 RNU6-948P-201ENST00000516374 107 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 AC109479.2-201ENST00000517842 174 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
HIST1H3AP68431 AC024995.1-201ENST00000523014 93 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 AC092451.2-201ENST00000538746 658 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 AL356157.2-201ENST00000605122 111 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 AC006001.4-201ENST00000622243 395 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 AC027514.1-201ENST00000588561 1603 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
HIST1H3AP68431 RNU6-1335P-201ENST00000365426 107 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 RNU6-45P-201ENST00000384471 107 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 RNA5SP467-201ENST00000391274 118 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 AL355796.1-201ENST00000406706 323 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 MIR1253-201ENST00000408273 105 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 AC090960.1-201ENST00000421072 306 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.32□□□□□ -2.36
HIST1H3AP68431 AC007283.2-201ENST00000424739 197 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 RPS24P1-201ENST00000438550 371 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H3AP68431 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H3AP68431 RPL39P39-201ENST00000455840 151 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 RNU7-90P-201ENST00000459216 62 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 RNU7-21P-201ENST00000459430 62 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H3AP68431 HMGB1P29-201ENST00000505659 499 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H3AP68431 ZNF519P3-201ENST00000557158 1032 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H3AP68431 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.32□□□□□ -2.36
HIST1H3AP68431 Z99497.2-201ENST00000603634 310 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 Z99289.3-201ENST00000605586 594 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 AC013244.3-201ENST00000605614 388 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 AC008250.2-201ENST00000615261 205 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.32□□□□□ -2.36
HIST1H3AP68431 AL450472.1-202ENST00000637286 180 ntBASIC0.32□□□□□ -2.36
HIST1H3AP68431 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
HIST1H3AP68431 SNORA36A-201ENST00000384221 132 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 MIR558-201ENST00000384920 94 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 SNORD41-201ENST00000386967 70 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AL031577.2-201ENST00000404133 280 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 MTCYBP36-201ENST00000404146 440 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 MED13P1-201ENST00000428342 171 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AL358794.1-201ENST00000445689 381 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
HIST1H3AP68431 AC104982.1-201ENST00000478775 574 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AC113410.1-201ENST00000505029 247 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 RNU6-1069P-201ENST00000516612 133 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AC023050.3-201ENST00000541142 333 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 BNIP3P40-201ENST00000596017 556 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AC064807.4-201ENST00000607201 407 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AC243994.1-201ENST00000618627 109 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AP000484.1-201ENST00000620067 1252 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 AL513423.1-201ENST00000621695 132 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 CASC19-280ENST00000642102 1351 ntBASIC0.31□□□□□ -2.36
HIST1H3AP68431 RNU6-562P-201ENST00000362731 107 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 RNU6-1093P-201ENST00000391194 107 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 SNORD99-201ENST00000408612 74 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 RNA5SP247-201ENST00000411181 105 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 SNAP23P1-201ENST00000433229 246 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 AL606662.1-201ENST00000445763 553 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 AC016550.1-201ENST00000505348 785 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 AC010587.1-201ENST00000505809 469 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 RNU6-496P-201ENST00000516145 99 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 RNU6-405P-201ENST00000516637 110 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 RNU6-467P-201ENST00000517027 110 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 RNU6-685P-201ENST00000517088 95 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 DEFB131C-201ENST00000528817 165 ntBASIC0.3□□□□□ -2.36
HIST1H3AP68431 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.3□□□□□ -2.36
HIST1H3AP68431 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms