Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 Y_RNA.672-201ENST00000516289 104 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 RN7SKP49-201ENST00000516675 260 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 RNU2-46P-201ENST00000517038 113 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 AC090572.1-201ENST00000519251 160 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 PCMTD1P2-201ENST00000565017 355 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 MIR5000-201ENST00000577717 103 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.64□□□□□ -2.31
AP1S1P61966 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.64□□□□□ -2.31
AP1S1P61966 AC009509.4-201ENST00000619202 509 ntBASIC0.64□□□□□ -2.31
AP1S1P61966 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.64□□□□□ -2.31
AP1S1P61966 BX322639.1-202ENST00000423987 2213 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
AP1S1P61966 RNU4-56P-201ENST00000364700 142 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 RNU6-1026P-201ENST00000384465 108 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 MIR513B-201ENST00000385136 84 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 RNA5SP109-201ENST00000391010 116 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 RNU6-387P-201ENST00000411331 105 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.63□□□□□ -2.31
AP1S1P61966 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.63□□□□□ -2.31
AP1S1P61966 AC011233.1-201ENST00000422812 283 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 AC010154.1-201ENST00000425857 269 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 USP9YP28-201ENST00000435142 589 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.63□□□□□ -2.31
AP1S1P61966 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.63□□□□□ -2.31
AP1S1P61966 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.63□□□□□ -2.31
AP1S1P61966 MTCO3P7-201ENST00000510008 774 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 AC067942.3-201ENST00000512025 362 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 LRRC34P2-201ENST00000514850 553 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 RNA5SP220-201ENST00000516298 104 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.63□□□□□ -2.31
AP1S1P61966 CYP4A27P-201ENST00000567218 190 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.63□□□□□ -2.31
AP1S1P61966 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.62□□□□□ -2.31
AP1S1P61966 RNU5E-5P-201ENST00000365379 116 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 Y_RNA.367-201ENST00000365544 101 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 RNU6-827P-201ENST00000365553 106 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 RNY1P14-201ENST00000384426 108 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 MIR518E-201ENST00000385252 88 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 MIR208B-201ENST00000401172 77 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 SSR1P2-201ENST00000415208 787 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.62□□□□□ -2.31
AP1S1P61966 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.62□□□□□ -2.31
AP1S1P61966 AL031274.1-201ENST00000450334 232 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.62□□□□□ -2.31
AP1S1P61966 RNU7-34P-201ENST00000459394 64 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 HMGN1P12-201ENST00000499125 195 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.62□□□□□ -2.31
AP1S1P61966 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.62□□□□□ -2.31
AP1S1P61966 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 AL929325.1-201ENST00000603096 117 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 AC112191.3-201ENST00000604371 277 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 Z99289.3-201ENST00000605586 594 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 AL353149.1-201ENST00000610667 244 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.62□□□□□ -2.31
AP1S1P61966 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.62□□□□□ -2.31
AP1S1P61966 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.62□□□□□ -2.31
AP1S1P61966 AC009541.1-201ENST00000438279 2662 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC092268.1-201ENST00000342691 405 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 RNU6-1287P-201ENST00000362914 107 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 RNU6-534P-201ENST00000364877 106 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 RNU6-1060P-201ENST00000384664 107 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 RNA5SP467-201ENST00000391274 118 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 RNU2-8P-201ENST00000410727 190 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.61□□□□□ -2.31
AP1S1P61966 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.61□□□□□ -2.31
AP1S1P61966 AC048334.1-201ENST00000477975 159 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC008628.2-201ENST00000502605 298 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.61□□□□□ -2.31
AP1S1P61966 AC109479.2-201ENST00000517842 174 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC022878.1-201ENST00000530684 149 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
AP1S1P61966 TMF1P1-201ENST00000576058 373 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 MIR5695-201ENST00000579717 85 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 MTCO2P2-201ENST00000591258 225 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC002044.1-201ENST00000606707 158 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC021506.2-201ENST00000612354 169 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC005520.5-201ENST00000613926 164 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC008250.2-201ENST00000615261 205 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AC006927.3-201ENST00000638789 384 ntBASIC0.61□□□□□ -2.31
AP1S1P61966 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.61□□□□□ -2.31
AP1S1P61966 AL442644.1-201ENST00000454390 3105 ntBASIC0.6□□□□□ -2.31
AP1S1P61966 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
AP1S1P61966 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
AP1S1P61966 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
AP1S1P61966 RNU6-500P-201ENST00000362349 107 ntBASIC0.6□□□□□ -2.31
AP1S1P61966 Y_RNA.363-201ENST00000365529 113 ntBASIC0.6□□□□□ -2.31
AP1S1P61966 MIR19B1-201ENST00000384829 87 ntBASIC0.6□□□□□ -2.31
AP1S1P61966 MIR549A-201ENST00000385268 96 ntBASIC0.6□□□□□ -2.31
AP1S1P61966 RNU6-910P-201ENST00000390844 107 ntBASIC0.6□□□□□ -2.31
AP1S1P61966 HMGN2P34-201ENST00000437647 269 ntBASIC0.6□□□□□ -2.31
AP1S1P61966 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.6□□□□□ -2.31
AP1S1P61966 AC069257.2-201ENST00000441819 155 ntBASIC0.6□□□□□ -2.31
AP1S1P61966 USP9YP12-201ENST00000450481 570 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms