Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC096920.1-201ENST00000423991 241 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AL590632.1-201ENST00000424289 371 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AL513185.2-201ENST00000425543 193 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 RPS15AP28-201ENST00000435088 386 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 USP9YP28-201ENST00000435142 589 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AC245517.4-201ENST00000448601 281 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AC245102.2-201ENST00000448956 180 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMK1P53667 RPS29P27-201ENST00000463711 170 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.14□□□□□ -2.07
LIMK1P53667 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMK1P53667 AC021146.2-201ENST00000504736 556 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMK1P53667 AC018630.3-201ENST00000542637 96 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 MIR4299-201ENST00000577899 72 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMK1P53667 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMK1P53667 AC019193.3-201ENST00000609144 554 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AC092794.1-201ENST00000612734 582 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMK1P53667 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 AL160394.1-201ENST00000624765 724 ntBASIC2.14□□□□□ -2.07
LIMK1P53667 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.14□□□□□ -2.07
LIMK1P53667 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
LIMK1P53667 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LIMK1P53667 Y_RNA.86-201ENST00000363020 111 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 SNORD116-11-201ENST00000383882 92 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 RNU6-26P-201ENST00000383985 107 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 RNU6-968P-201ENST00000384076 107 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 RNU6-378P-201ENST00000384324 107 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 MIR518E-201ENST00000385252 88 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 FGF7P8-201ENST00000402994 292 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 MTCYBP2-201ENST00000407745 171 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 Y_RNA.599-201ENST00000410489 109 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 RNA5SP494-201ENST00000410653 129 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 PRELID3BP1-201ENST00000457142 540 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 AC130509.1-201ENST00000464158 433 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 AF235103.2-201ENST00000525753 346 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.13□□□□□ -2.07
LIMK1P53667 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.13□□□□□ -2.07
LIMK1P53667 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.13□□□□□ -2.07
LIMK1P53667 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.13□□□□□ -2.07
LIMK1P53667 MIR3942-201ENST00000585264 109 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 POLR3GP2-201ENST00000588366 668 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 PCGEM1.1-201ENST00000613431 131 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 AL136221.1-201ENST00000621449 509 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 MIR1248-201ENST00000629190 106 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 SNORA43.4-201ENST00000629559 138 ntBASIC2.13□□□□□ -2.07
LIMK1P53667 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
LIMK1P53667 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
LIMK1P53667 MIR378A-201ENST00000362177 66 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 Y_RNA.212-201ENST00000364177 102 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 RNU6-95P-201ENST00000384697 107 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 SNORA26.3-201ENST00000391119 136 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 MTATP6P13-201ENST00000438531 667 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.12□□□□□ -2.07
LIMK1P53667 snoU13.6-201ENST00000458785 104 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 RNU7-66P-201ENST00000459469 62 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LIMK1P53667 EIF4A1P12-201ENST00000551910 141 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.12□□□□□ -2.07
LIMK1P53667 SNORA59B-202ENST00000578183 701 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 CPDP1-201ENST00000579660 283 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 AL133215.3-201ENST00000609801 448 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 MIR8070-201ENST00000616510 88 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 AL132822.1-201ENST00000617063 513 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 AC006504.8-201ENST00000621046 635 ntBASIC2.12□□□□□ -2.07
LIMK1P53667 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.11□□□□□ -2.07
LIMK1P53667 AC233981.2-201ENST00000611524 1614 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 SNORA29-201ENST00000384183 140 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 Y_RNA.505-201ENST00000384489 102 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 RNU6-831P-201ENST00000384548 107 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 MIR29C-201ENST00000385231 88 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 SNORA48.3-201ENST00000391081 134 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 AL357139.1-201ENST00000407792 426 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 RNU2-48P-201ENST00000410694 191 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 MTND1P11-201ENST00000456661 876 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 RPS29P25-201ENST00000481709 171 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 PTP4A1P4-201ENST00000512479 322 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.11□□□□□ -2.07
LIMK1P53667 ACA59.1-201ENST00000515966 143 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 RNU4-49P-201ENST00000516080 140 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.11□□□□□ -2.07
LIMK1P53667 MRPS36P4-201ENST00000534436 298 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.11□□□□□ -2.07
LIMK1P53667 FGF7P1-201ENST00000582820 288 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 MIR5002-201ENST00000584713 97 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 AC018638.8-201ENST00000588755 281 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 AC002984.1-201ENST00000591692 448 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 AL450472.1-202ENST00000637286 180 ntBASIC2.11□□□□□ -2.07
LIMK1P53667 SNORD32B-201ENST00000364460 84 ntBASIC2.1□□□□□ -2.07
LIMK1P53667 RNU6-438P-201ENST00000365561 103 ntBASIC2.1□□□□□ -2.07
LIMK1P53667 MIR517A-201ENST00000385001 87 ntBASIC2.1□□□□□ -2.07
LIMK1P53667 RNU6-510P-201ENST00000391239 108 ntBASIC2.1□□□□□ -2.07
LIMK1P53667 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms