Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 Y_RNA.372-201ENST00000365599 102 ntBASIC1.8□□□□□ -2.12
SMSP52788 RNU6-784P-201ENST00000384330 106 ntBASIC1.8□□□□□ -2.12
SMSP52788 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SMSP52788 SNORA40.18-201ENST00000391200 128 ntBASIC1.8□□□□□ -2.12
SMSP52788 AL590002.1-201ENST00000406554 418 ntBASIC1.8□□□□□ -2.12
SMSP52788 RNU6-325P-201ENST00000411132 105 ntBASIC1.8□□□□□ -2.12
SMSP52788 AC016907.1-201ENST00000419483 435 ntBASIC1.8□□□□□ -2.12
SMSP52788 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.8□□□□□ -2.12
SMSP52788 MTND3P9-201ENST00000429526 346 ntBASIC1.8□□□□□ -2.12
SMSP52788 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.8□□□□□ -2.12
SMSP52788 MTCO2P7-201ENST00000446518 666 ntBASIC1.8□□□□□ -2.12
SMSP52788 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.8□□□□□ -2.12
SMSP52788 HMGN2P26-201ENST00000463169 339 ntBASIC1.8□□□□□ -2.12
SMSP52788 AC083904.1-201ENST00000487828 231 ntBASIC1.8□□□□□ -2.12
SMSP52788 RPS23P5-201ENST00000495419 428 ntBASIC1.8□□□□□ -2.12
SMSP52788 HMGB3P17-201ENST00000504195 649 ntBASIC1.8□□□□□ -2.12
SMSP52788 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.8□□□□□ -2.12
SMSP52788 RNU6-1053P-201ENST00000515930 101 ntBASIC1.8□□□□□ -2.12
SMSP52788 Y_RNA.665-201ENST00000516177 98 ntBASIC1.8□□□□□ -2.12
SMSP52788 RNU5F-4P-201ENST00000516581 114 ntBASIC1.8□□□□□ -2.12
SMSP52788 RNU2-44P-201ENST00000516795 194 ntBASIC1.8□□□□□ -2.12
SMSP52788 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.8□□□□□ -2.12
SMSP52788 AC026371.1-201ENST00000551867 419 ntBASIC1.8□□□□□ -2.12
SMSP52788 AC090517.1-201ENST00000569307 266 ntBASIC1.8□□□□□ -2.12
SMSP52788 Y_RNA.783-201ENST00000613546 102 ntBASIC1.8□□□□□ -2.12
SMSP52788 AL590240.4-201ENST00000616908 390 ntBASIC1.8□□□□□ -2.12
SMSP52788 Y_RNA.4-201ENST00000362333 112 ntBASIC1.79□□□□□ -2.12
SMSP52788 SNORD113-7-201ENST00000363762 77 ntBASIC1.79□□□□□ -2.12
SMSP52788 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
SMSP52788 RNU6-1093P-201ENST00000391194 107 ntBASIC1.79□□□□□ -2.12
SMSP52788 Y_RNA.595-201ENST00000410403 105 ntBASIC1.79□□□□□ -2.12
SMSP52788 AL139156.1-201ENST00000412785 841 ntBASIC1.79□□□□□ -2.12
SMSP52788 MTCO1P21-201ENST00000416634 589 ntBASIC1.79□□□□□ -2.12
SMSP52788 USP9YP28-201ENST00000435142 589 ntBASIC1.79□□□□□ -2.12
SMSP52788 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.79□□□□□ -2.12
SMSP52788 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.79□□□□□ -2.12
SMSP52788 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
SMSP52788 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.79□□□□□ -2.12
SMSP52788 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.79□□□□□ -2.12
SMSP52788 RNU6-1332P-201ENST00000516666 104 ntBASIC1.79□□□□□ -2.12
SMSP52788 AC109635.3-201ENST00000529536 185 ntBASIC1.79□□□□□ -2.12
SMSP52788 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.79□□□□□ -2.12
SMSP52788 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMSP52788 AL133215.3-201ENST00000609801 448 ntBASIC1.79□□□□□ -2.12
SMSP52788 MTND5P9-201ENST00000503854 1755 ntBASIC1.79□□□□□ -2.12
SMSP52788 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.79□□□□□ -2.12
SMSP52788 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SMSP52788 RNU4-40P-201ENST00000364351 143 ntBASIC1.78□□□□□ -2.12
SMSP52788 Y_RNA.530-201ENST00000384587 101 ntBASIC1.78□□□□□ -2.12
SMSP52788 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SMSP52788 SNORA12.2-201ENST00000391040 156 ntBASIC1.78□□□□□ -2.12
SMSP52788 ZNF885P-201ENST00000420174 1098 ntBASIC1.78□□□□□ -2.12
SMSP52788 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.78□□□□□ -2.12
SMSP52788 MTCO1P44-201ENST00000441935 243 ntBASIC1.78□□□□□ -2.12
SMSP52788 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.78□□□□□ -2.12
SMSP52788 AC007395.1-201ENST00000451333 677 ntBASIC1.78□□□□□ -2.12
SMSP52788 RNU6-314P-201ENST00000516574 104 ntBASIC1.78□□□□□ -2.12
SMSP52788 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.78□□□□□ -2.12
SMSP52788 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.78□□□□□ -2.12
SMSP52788 ZNF519P2-201ENST00000557032 169 ntBASIC1.78□□□□□ -2.12
SMSP52788 AC026470.2-201ENST00000561492 181 ntBASIC1.78□□□□□ -2.12
SMSP52788 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.78□□□□□ -2.12
SMSP52788 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.78□□□□□ -2.12
SMSP52788 MIR4498-201ENST00000577599 66 ntBASIC1.78□□□□□ -2.12
SMSP52788 MIR5089-201ENST00000580047 84 ntBASIC1.78□□□□□ -2.12
SMSP52788 AF250324.2-201ENST00000608299 610 ntBASIC1.78□□□□□ -2.12
SMSP52788 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SMSP52788 Y_RNA.38-201ENST00000362617 102 ntBASIC1.77□□□□□ -2.13
SMSP52788 Y_RNA.100-201ENST00000363141 102 ntBASIC1.77□□□□□ -2.13
SMSP52788 Y_RNA.123-201ENST00000363338 102 ntBASIC1.77□□□□□ -2.13
SMSP52788 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.77□□□□□ -2.13
SMSP52788 RNA5SP100-201ENST00000410903 110 ntBASIC1.77□□□□□ -2.13
SMSP52788 RNA5SP59-201ENST00000410922 110 ntBASIC1.77□□□□□ -2.13
SMSP52788 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.77□□□□□ -2.13
SMSP52788 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.77□□□□□ -2.13
SMSP52788 RN7SKP210-201ENST00000459176 261 ntBASIC1.77□□□□□ -2.13
SMSP52788 AC007215.1-201ENST00000464893 276 ntBASIC1.77□□□□□ -2.13
SMSP52788 RNVU1-2-201ENST00000516326 135 ntBASIC1.77□□□□□ -2.13
SMSP52788 RNU6-720P-201ENST00000516363 108 ntBASIC1.77□□□□□ -2.13
SMSP52788 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.77□□□□□ -2.13
SMSP52788 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.77□□□□□ -2.13
SMSP52788 SUB1P4-201ENST00000566062 339 ntBASIC1.77□□□□□ -2.13
SMSP52788 AC023043.2-201ENST00000589678 1026 ntBASIC1.77□□□□□ -2.13
SMSP52788 CTHRC1P1-201ENST00000605383 469 ntBASIC1.77□□□□□ -2.13
SMSP52788 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
SMSP52788 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.77□□□□□ -2.13
SMSP52788 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
SMSP52788 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.77□□□□□ -2.13
SMSP52788 AC022513.1-201ENST00000624512 117 ntBASIC1.77□□□□□ -2.13
SMSP52788 AL359697.1-201ENST00000624879 587 ntBASIC1.77□□□□□ -2.13
SMSP52788 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.77□□□□□ -2.13
SMSP52788 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SMSP52788 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SMSP52788 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SMSP52788 RNY4P14-201ENST00000363656 96 ntBASIC1.76□□□□□ -2.13
SMSP52788 Y_RNA.402-201ENST00000383972 102 ntBASIC1.76□□□□□ -2.13
SMSP52788 RNU6-968P-201ENST00000384076 107 ntBASIC1.76□□□□□ -2.13
SMSP52788 RNU6-933P-201ENST00000384424 107 ntBASIC1.76□□□□□ -2.13
SMSP52788 RNA5SP213-201ENST00000391031 106 ntBASIC1.76□□□□□ -2.13
SMSP52788 MIR300-201ENST00000401138 83 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms