Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RNU6-905P-201ENST00000384434 107 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 MIR181A2-201ENST00000384863 110 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 RNU6-554P-201ENST00000410466 106 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 SNORA74C-2-201ENST00000411179 201 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 AC245291.1-201ENST00000419501 328 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 snoU13.1-201ENST00000459157 104 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 AC112771.1-201ENST00000463581 102 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 AC006463.2-201ENST00000473326 348 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF144AP50876 RNA5SP20-201ENST00000515976 84 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 RNU6-1098P-201ENST00000516772 96 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 IFITM8P-201ENST00000522529 394 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF144AP50876 AL020997.2-201ENST00000602607 184 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 AC093732.2-201ENST00000607950 274 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 uc_338.4-201ENST00000616635 176 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 MIR4727-201ENST00000622232 55 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF144AP50876 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF144AP50876 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF144AP50876 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF144AP50876 AC010889.1-201ENST00000566193 2666 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF144AP50876 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF144AP50876 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF144AP50876 AC006504.1-201ENST00000562493 3666 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RNF144AP50876 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF144AP50876 RNU6-1107P-201ENST00000364817 104 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RNF144AP50876 SNORA12.1-201ENST00000390873 148 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 SNORA26.2-201ENST00000390922 122 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 SDHCP2-201ENST00000398565 501 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 MIR1263-201ENST00000408324 86 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 RNA5SP39-201ENST00000411245 120 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF144AP50876 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF144AP50876 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF144AP50876 AC018630.3-201ENST00000542637 96 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF144AP50876 AC105245.1-201ENST00000581934 244 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 HSPE1P7-201ENST00000604681 321 ntBASIC3.98□□□□□ -1.77
RNF144AP50876 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF144AP50876 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF144AP50876 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF144AP50876 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RNF144AP50876 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF144AP50876 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF144AP50876 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF144AP50876 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF144AP50876 Y_RNA.52-201ENST00000362760 96 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 Y_RNA.281-201ENST00000364774 94 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 SNORD6-201ENST00000365444 73 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 RNA5SP511-201ENST00000410487 115 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 AL356387.2-201ENST00000422272 243 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 AC011998.1-201ENST00000433403 117 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 MTATP6P21-201ENST00000440681 189 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 SNORD77.4-201ENST00000516158 81 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF144AP50876 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF144AP50876 RPL23AP91-201ENST00000569211 455 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 AC022655.2-201ENST00000577280 318 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF144AP50876 MIR432-201ENST00000606207 94 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF144AP50876 AC016588.2-201ENST00000632484 3021 ntBASIC3.97□□□□□ -1.77
RNF144AP50876 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
RNF144AP50876 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF144AP50876 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF144AP50876 RNA5SP388-201ENST00000362584 119 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 RNA5SP175-201ENST00000364275 119 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 RNA5SP125-201ENST00000364843 120 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 Y_RNA.348-201ENST00000365403 103 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 SNORA56-201ENST00000383966 129 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 SNORA26-201ENST00000391286 122 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 RNY4P29-201ENST00000410801 97 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF144AP50876 ABCF2P2-201ENST00000450549 296 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 AL021397.1-201ENST00000451806 248 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 SNORA70.14-201ENST00000516205 110 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 RNA5SP519-201ENST00000516480 119 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 RNU1-104P-201ENST00000517280 175 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.96□□□□□ -1.78
RNF144AP50876 MIR4277-201ENST00000578298 84 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 MIR2681-201ENST00000581814 105 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 MIR4753-201ENST00000585119 83 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 AC097639.2-201ENST00000603159 172 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 AC079587.1-201ENST00000603846 277 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 AC113403.1-201ENST00000604910 193 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 AC058791.1-201ENST00000608412 3198 ntBASIC3.96□□□□□ -1.78
RNF144AP50876 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms