Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 AL357078.3-201ENST00000607528 618 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 AL359880.1-201ENST00000621879 266 ntBASIC1.32□□□□□ -2.2
CSNK1A1P48729 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.32□□□□□ -2.2
CSNK1A1P48729 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CSNK1A1P48729 AL161722.3-201ENST00000605789 2983 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 RNU6-227P-201ENST00000362865 103 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 RNU6-1317P-201ENST00000364582 104 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 RNU6-60P-201ENST00000364792 103 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 RNU6-439P-201ENST00000384188 106 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 MIR764-201ENST00000390811 85 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 RNU6-1106P-201ENST00000390845 107 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 MIR208B-201ENST00000401172 77 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 TIMM9P3-201ENST00000428659 274 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 MTND3P9-201ENST00000429526 346 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 MTND2P22-201ENST00000444325 1033 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 RNU7-14P-201ENST00000459331 62 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 AC087477.1-201ENST00000465747 340 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 RPL9P9-202ENST00000466501 579 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 AC107401.1-201ENST00000503426 685 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 AC108210.2-201ENST00000503681 201 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 RNU6-567P-201ENST00000516746 107 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 AL157687.1-201ENST00000554853 619 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 SUB1P4-201ENST00000566062 339 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.31□□□□□ -2.2
CSNK1A1P48729 AC064807.4-201ENST00000607201 407 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 MIR7843-201ENST00000622274 79 ntBASIC1.31□□□□□ -2.2
CSNK1A1P48729 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
CSNK1A1P48729 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC245060.5-201ENST00000610778 3293 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 Y_RNA.67-201ENST00000362870 100 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 RNU1-76P-201ENST00000362903 159 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 RNU1-17P-201ENST00000363022 152 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 RNU1-42P-201ENST00000364033 160 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 RNU6-522P-201ENST00000364497 107 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 SNORA32.2-201ENST00000384049 122 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 SNORA29-201ENST00000384183 140 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 RNU2-16P-201ENST00000410712 136 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 RNU6-1068P-201ENST00000410958 103 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC139712.2-201ENST00000424302 339 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC245517.4-201ENST00000448601 281 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 snoU13.6-201ENST00000458785 104 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 snoU13.23-201ENST00000458863 104 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 snoU13.9-201ENST00000458927 103 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC010409.1-201ENST00000487382 476 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC019235.1-201ENST00000503847 207 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 SNORA19.2-201ENST00000516013 114 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 SCOCP1-201ENST00000554676 349 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC090517.1-201ENST00000569307 266 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.3□□□□□ -2.2
CSNK1A1P48729 RNU6-89P-201ENST00000606519 100 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC092954.2-201ENST00000609103 430 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 AC073534.2-201ENST00000620377 381 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 MTND5P10-201ENST00000603719 1809 ntBASIC1.3□□□□□ -2.2
CSNK1A1P48729 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CSNK1A1P48729 RNU5B-2P-201ENST00000363036 113 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 SNORD31B-201ENST00000364977 69 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 RNU6-438P-201ENST00000365561 103 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 RNU6-1093P-201ENST00000391194 107 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 RNU1-78P-201ENST00000391248 165 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CSNK1A1P48729 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.29□□□□□ -2.2
CSNK1A1P48729 AC007098.1-201ENST00000420122 367 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 MTCO3P46-201ENST00000425787 232 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.29□□□□□ -2.2
CSNK1A1P48729 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 AL359672.1-201ENST00000442302 409 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 Z83846.1-201ENST00000446798 265 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 AC005908.1-201ENST00000468701 347 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 AC083904.1-201ENST00000487828 231 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 AC093534.1-201ENST00000504977 132 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.29□□□□□ -2.2
CSNK1A1P48729 RNU5F-4P-201ENST00000516581 114 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 DEFB131C-201ENST00000528817 165 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 MRPS36P4-201ENST00000534436 298 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CSNK1A1P48729 AL512360.1-201ENST00000555346 234 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 MIR4298-201ENST00000584380 73 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.29□□□□□ -2.2
CSNK1A1P48729 AC103591.3-201ENST00000608684 209 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 FAM157A-202ENST00000615155 405 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 AL136221.1-201ENST00000621449 509 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.29□□□□□ -2.2
CSNK1A1P48729 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CSNK1A1P48729 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
CSNK1A1P48729 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms