Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC106785.1-201ENST00000565935 262 ntBASIC3.91□□□□□ -1.78
CHRNA4P43681 AC099778.2-201ENST00000610904 211 ntBASIC3.91□□□□□ -1.78
CHRNA4P43681 MIR3529-201ENST00000637713 78 ntBASIC3.91□□□□□ -1.78
CHRNA4P43681 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA4P43681 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA4P43681 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHRNA4P43681 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
CHRNA4P43681 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
CHRNA4P43681 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CHRNA4P43681 AC106871.1-201ENST00000568324 3102 ntBASIC3.9□□□□□ -1.78
CHRNA4P43681 ADAM3A-203ENST00000461344 2157 ntBASIC3.9□□□□□ -1.78
CHRNA4P43681 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
CHRNA4P43681 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHRNA4P43681 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CHRNA4P43681 Y_RNA.528-201ENST00000384575 108 ntBASIC3.9□□□□□ -1.79
CHRNA4P43681 MIR1263-201ENST00000408324 86 ntBASIC3.9□□□□□ -1.79
CHRNA4P43681 AC117454.1-201ENST00000491120 168 ntBASIC3.9□□□□□ -1.79
CHRNA4P43681 MLLT10P2-201ENST00000506434 249 ntBASIC3.9□□□□□ -1.79
CHRNA4P43681 AL606490.9-201ENST00000603331 271 ntBASIC3.9□□□□□ -1.79
CHRNA4P43681 U6.115-201ENST00000636045 103 ntBASIC3.9□□□□□ -1.79
CHRNA4P43681 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHRNA4P43681 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHRNA4P43681 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CHRNA4P43681 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA4P43681 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHRNA4P43681 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHRNA4P43681 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA4P43681 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
CHRNA4P43681 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CHRNA4P43681 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.89□□□□□ -1.79
CHRNA4P43681 Y_RNA.49-201ENST00000362714 112 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 RNU6-1296P-201ENST00000383879 107 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 RNU6-1080P-201ENST00000383982 107 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 Y_RNA.587-201ENST00000391210 103 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 AL135786.1-201ENST00000415892 214 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 AC019205.3-201ENST00000424573 156 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.89□□□□□ -1.79
CHRNA4P43681 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.89□□□□□ -1.79
CHRNA4P43681 SNORA84-201ENST00000459229 133 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 AC103975.1-201ENST00000482506 483 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.89□□□□□ -1.79
CHRNA4P43681 ATP5EP1-201ENST00000510257 156 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.89□□□□□ -1.79
CHRNA4P43681 RNU6-344P-201ENST00000516635 111 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 RN7SL703P-201ENST00000578485 302 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 SNORD115-40-201ENST00000606510 82 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 SNORD11B-201ENST00000607707 90 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 MALAT1.1-201ENST00000618249 95 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 Y_RNA.818-201ENST00000618813 71 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 MIR3202-2-201ENST00000635980 79 ntBASIC3.89□□□□□ -1.79
CHRNA4P43681 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.89□□□□□ -1.79
CHRNA4P43681 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA4P43681 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CHRNA4P43681 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA4P43681 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CHRNA4P43681 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
CHRNA4P43681 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA4P43681 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA4P43681 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA4P43681 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA4P43681 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA4P43681 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CHRNA4P43681 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CHRNA4P43681 AP002088.1-201ENST00000382740 395 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 MIR199A2-201ENST00000385289 110 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 RNA5SP496-201ENST00000391240 109 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 PPIAP31-201ENST00000405422 495 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 AL356535.1-201ENST00000440335 398 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 AL021397.1-201ENST00000451806 248 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA4P43681 RAC1P2-201ENST00000511164 579 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 RNU1-104P-201ENST00000517280 175 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 AC022695.1-201ENST00000522089 237 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 AC034105.4-201ENST00000568304 277 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA4P43681 AL021707.8-201ENST00000609428 183 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 MIR6134-201ENST00000617606 109 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.88□□□□□ -1.79
CHRNA4P43681 MIR2052-201ENST00000636055 55 ntBASIC3.88□□□□□ -1.79
CHRNA4P43681 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA4P43681 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA4P43681 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA4P43681 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CHRNA4P43681 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA4P43681 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.87□□□□□ -1.79
CHRNA4P43681 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA4P43681 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA4P43681 Y_RNA.52-201ENST00000362760 96 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 RNY1P10-201ENST00000363268 113 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 SNORD87-201ENST00000364849 89 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 Y_RNA.466-201ENST00000384294 113 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 U3.26-201ENST00000391236 204 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 MIR208B-201ENST00000401172 77 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 AC005300.1-201ENST00000428401 373 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 CALM2P4-201ENST00000430810 426 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 MTATP8P2-201ENST00000435212 202 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 AL500522.2-201ENST00000448562 343 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 SNORD108-201ENST00000459332 71 ntBASIC3.87□□□□□ -1.79
CHRNA4P43681 AC090525.1-201ENST00000479116 478 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms