Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ATP5A1P2-201ENST00000412323 255 ntBASIC3.55□□□□□ -1.84
CCNFP41002 RPS3P1-201ENST00000456781 192 ntBASIC3.55□□□□□ -1.84
CCNFP41002 SNORD105B-201ENST00000458770 79 ntBASIC3.55□□□□□ -1.84
CCNFP41002 RNU7-120P-201ENST00000459334 63 ntBASIC3.55□□□□□ -1.84
CCNFP41002 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNFP41002 RNY3P16-201ENST00000516338 101 ntBASIC3.55□□□□□ -1.84
CCNFP41002 AP002001.1-203ENST00000534002 267 ntBASIC3.55□□□□□ -1.84
CCNFP41002 AC026470.2-201ENST00000561492 181 ntBASIC3.55□□□□□ -1.84
CCNFP41002 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.55□□□□□ -1.84
CCNFP41002 AC006380.1-201ENST00000603598 186 ntBASIC3.55□□□□□ -1.84
CCNFP41002 SNORD11B-201ENST00000607707 90 ntBASIC3.55□□□□□ -1.84
CCNFP41002 UCA1.1-201ENST00000620952 75 ntBASIC3.55□□□□□ -1.84
CCNFP41002 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCNFP41002 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCNFP41002 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.82-201ENST00000363000 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.92-201ENST00000363043 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 RNA5SP197-201ENST00000363357 119 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.235-201ENST00000364412 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.306-201ENST00000365015 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.308-201ENST00000365043 101 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.312-201ENST00000365089 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.322-201ENST00000365151 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 AC004866.1-201ENST00000411748 78 ntBASIC3.54□□□□□ -1.84
CCNFP41002 AL035423.1-201ENST00000420331 213 ntBASIC3.54□□□□□ -1.84
CCNFP41002 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.650-201ENST00000459002 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 RN7SL542P-201ENST00000467147 294 ntBASIC3.54□□□□□ -1.84
CCNFP41002 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNFP41002 RPL31P41-201ENST00000477967 372 ntBASIC3.54□□□□□ -1.84
CCNFP41002 AC109925.1-201ENST00000478069 331 ntBASIC3.54□□□□□ -1.84
CCNFP41002 RN7SKP18-201ENST00000516005 275 ntBASIC3.54□□□□□ -1.84
CCNFP41002 RNU2-44P-201ENST00000516795 194 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.777-201ENST00000516982 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNFP41002 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.771-201ENST00000598668 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.54□□□□□ -1.84
CCNFP41002 TCL6_2.1-201ENST00000615162 119 ntBASIC3.54□□□□□ -1.84
CCNFP41002 Y_RNA.789-201ENST00000622480 102 ntBASIC3.54□□□□□ -1.84
CCNFP41002 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.54□□□□□ -1.84
CCNFP41002 AC069528.2-201ENST00000624849 1991 ntBASIC3.54□□□□□ -1.84
CCNFP41002 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNFP41002 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCNFP41002 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCNFP41002 RNU1-75P-201ENST00000347264 129 ntBASIC3.53□□□□□ -1.84
CCNFP41002 SNORA70.4-201ENST00000365509 134 ntBASIC3.53□□□□□ -1.84
CCNFP41002 MIR200C-201ENST00000384980 68 ntBASIC3.53□□□□□ -1.84
CCNFP41002 PCNPP3-201ENST00000393579 471 ntBASIC3.53□□□□□ -1.84
CCNFP41002 RNU2-54P-201ENST00000410299 190 ntBASIC3.53□□□□□ -1.84
CCNFP41002 AL445584.1-201ENST00000431451 330 ntBASIC3.53□□□□□ -1.84
CCNFP41002 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCNFP41002 COX6CP14-201ENST00000469580 174 ntBASIC3.53□□□□□ -1.84
CCNFP41002 AC006445.1-201ENST00000491925 405 ntBASIC3.53□□□□□ -1.84
CCNFP41002 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.53□□□□□ -1.84
CCNFP41002 DEFB131C-201ENST00000528817 165 ntBASIC3.53□□□□□ -1.84
CCNFP41002 AC079598.5-201ENST00000547460 117 ntBASIC3.53□□□□□ -1.84
CCNFP41002 MIR4282-201ENST00000583613 67 ntBASIC3.53□□□□□ -1.84
CCNFP41002 AC010620.2-201ENST00000600135 313 ntBASIC3.53□□□□□ -1.84
CCNFP41002 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.53□□□□□ -1.84
CCNFP41002 AC073349.3-201ENST00000617616 186 ntBASIC3.53□□□□□ -1.84
CCNFP41002 AP003355.3-201ENST00000623465 114 ntBASIC3.53□□□□□ -1.84
CCNFP41002 AC090517.3-201ENST00000625170 141 ntBASIC3.53□□□□□ -1.84
CCNFP41002 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNFP41002 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNFP41002 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNFP41002 AC103988.1-201ENST00000566382 2177 ntBASIC3.52□□□□□ -1.85
CCNFP41002 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNFP41002 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNFP41002 AL359854.1-201ENST00000614203 1594 ntBASIC3.52□□□□□ -1.85
CCNFP41002 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNFP41002 MIR449B-201ENST00000384995 97 ntBASIC3.52□□□□□ -1.85
CCNFP41002 RNU6-1199P-201ENST00000411249 104 ntBASIC3.52□□□□□ -1.85
CCNFP41002 AC009963.1-201ENST00000417265 157 ntBASIC3.52□□□□□ -1.85
CCNFP41002 AC097463.2-201ENST00000421074 142 ntBASIC3.52□□□□□ -1.85
CCNFP41002 RPL23AP83-201ENST00000434984 473 ntBASIC3.52□□□□□ -1.85
CCNFP41002 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNFP41002 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
CCNFP41002 AC074198.2-201ENST00000508153 258 ntBASIC3.52□□□□□ -1.85
CCNFP41002 RAC1P5-201ENST00000512182 576 ntBASIC3.52□□□□□ -1.85
CCNFP41002 RNU6-191P-201ENST00000516295 94 ntBASIC3.52□□□□□ -1.85
CCNFP41002 MIR4765-201ENST00000585007 77 ntBASIC3.52□□□□□ -1.85
CCNFP41002 AC107294.3-201ENST00000609211 526 ntBASIC3.52□□□□□ -1.85
CCNFP41002 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.52□□□□□ -1.85
CCNFP41002 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCNFP41002 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNFP41002 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNFP41002 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNFP41002 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNFP41002 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CCNFP41002 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CCNFP41002 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.51□□□□□ -1.85
CCNFP41002 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CCNFP41002 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCNFP41002 RNU6-682P-201ENST00000363843 106 ntBASIC3.51□□□□□ -1.85
CCNFP41002 SNORD46.1-201ENST00000364139 104 ntBASIC3.51□□□□□ -1.85
CCNFP41002 RNA5SP51-201ENST00000364750 119 ntBASIC3.51□□□□□ -1.85
CCNFP41002 Y_RNA.329-201ENST00000365209 107 ntBASIC3.51□□□□□ -1.85
CCNFP41002 RNU6-1083P-201ENST00000384022 107 ntBASIC3.51□□□□□ -1.85
CCNFP41002 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms