Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 Y_RNA.146-201ENST00000363549 102 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 Y_RNA.187-201ENST00000363918 113 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC8P31273 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC8P31273 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC8P31273 ELOCP24-201ENST00000456370 334 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 MIR2053-201ENST00000459295 91 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 U8.21-201ENST00000459536 136 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 AP001025.1-201ENST00000486139 332 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 AC097473.1-201ENST00000508142 408 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 RNU6-991P-201ENST00000516168 107 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 RNU6-612P-201ENST00000516909 102 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 CPDP1-201ENST00000579660 283 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC8P31273 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 AC007742.2-201ENST00000618226 398 ntBASIC2.4□□□□□ -2.03
HOXC8P31273 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC8P31273 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HOXC8P31273 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC8P31273 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC8P31273 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC8P31273 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC8P31273 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HOXC8P31273 Y_RNA.48-201ENST00000362710 103 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 Y_RNA.132-201ENST00000363421 102 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 RNU6-890P-201ENST00000384121 107 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 AL445646.1-201ENST00000431784 216 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC8P31273 DAP3P1-201ENST00000441522 278 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC8P31273 RPL30P12-201ENST00000474666 353 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 FO393415.2-201ENST00000480085 343 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 ACA59.1-201ENST00000515966 143 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 RNU6-120P-201ENST00000516077 103 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 SCARNA16.2-201ENST00000516520 172 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC8P31273 ANP32BP3-201ENST00000559213 706 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC8P31273 AL713866.2-201ENST00000603579 219 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 AL080274.1-201ENST00000605565 220 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 AC133104.2-201ENST00000615272 193 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 MIR203B-201ENST00000636080 86 ntBASIC2.39□□□□□ -2.03
HOXC8P31273 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HOXC8P31273 RNU1-72P-201ENST00000362976 153 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 RNU6-1210P-201ENST00000363775 107 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 RPS29P13-201ENST00000402041 169 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 MIR1302-11-201ENST00000408051 138 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 MIR1302-9-201ENST00000408365 138 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 MIR1302-10-201ENST00000408734 138 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 SNORA11.4-201ENST00000408823 129 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 AC008267.5-201ENST00000424928 265 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 USMG5P1-201ENST00000425964 177 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 RPL23AP50-201ENST00000434149 455 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXC8P31273 RPL39P29-201ENST00000447779 157 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC8P31273 AC011753.1-201ENST00000451001 220 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC8P31273 AP000705.1-201ENST00000454567 350 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 Y_RNA.638-201ENST00000459374 113 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 AC068781.1-201ENST00000488231 618 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC8P31273 SNORA48.11-201ENST00000517015 89 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 CYCSP26-201ENST00000534107 320 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 AC018889.1-201ENST00000605372 397 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 MIR1302-2-201ENST00000607096 138 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 MIR6132-201ENST00000622083 109 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 MTND5P10-201ENST00000603719 1809 ntBASIC2.38□□□□□ -2.03
HOXC8P31273 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HOXC8P31273 MIR6073-201ENST00000352083 89 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 SNORD42.2-201ENST00000365570 69 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 RNU6-1227P-201ENST00000383981 107 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 RNU6-1032P-201ENST00000384100 107 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 RNU6-474P-201ENST00000384243 107 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 RNU6-692P-201ENST00000384496 107 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HOXC8P31273 U8.13-201ENST00000390842 128 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 AL590556.1-201ENST00000423231 483 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 AIMP1P2-201ENST00000425294 312 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 AC005534.2-201ENST00000431047 433 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 AL603825.1-201ENST00000438481 80 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC8P31273 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.37□□□□□ -2.03
HOXC8P31273 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC8P31273 MIR4273-201ENST00000582824 84 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 AC245884.12-201ENST00000615364 59 ntBASIC2.37□□□□□ -2.03
HOXC8P31273 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HOXC8P31273 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
HOXC8P31273 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 SNORA25.6-201ENST00000364121 118 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 RNU6-1040P-201ENST00000383974 107 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 Y_RNA.445-201ENST00000384168 102 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 MIR544A-201ENST00000384855 91 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 MIR95-201ENST00000385072 81 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 RNU6-308P-201ENST00000390957 107 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 SNORA75.6-201ENST00000391318 127 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 CBX3P9-201ENST00000402326 552 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms