Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNA5SP341-201ENST00000516261 117 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 RNU1-143P-201ENST00000516296 146 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 RNU6-911P-201ENST00000516523 104 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 SCARNA20.6-201ENST00000517251 106 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.59□□□□□ -1.99
TNFSF4P23510 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.59□□□□□ -1.99
TNFSF4P23510 AC023442.1-201ENST00000531247 422 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 AC093023.1-201ENST00000547375 507 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 SNRPGP18-201ENST00000553000 214 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 SNORD14A-201ENST00000606526 91 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 U1.23-201ENST00000610293 146 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 RNU1-68P-201ENST00000615382 146 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 U1.39-201ENST00000621562 146 ntBASIC2.59□□□□□ -1.99
TNFSF4P23510 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.59□□□□□ -1.99
TNFSF4P23510 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
TNFSF4P23510 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TNFSF4P23510 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
TNFSF4P23510 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.58□□□□□ -2
TNFSF4P23510 MIR369-201ENST00000362155 70 ntBASIC2.58□□□□□ -2
TNFSF4P23510 RNU4-42P-201ENST00000364738 142 ntBASIC2.58□□□□□ -2
TNFSF4P23510 Y_RNA.332-201ENST00000365271 113 ntBASIC2.58□□□□□ -2
TNFSF4P23510 MIR29C-201ENST00000385231 88 ntBASIC2.58□□□□□ -2
TNFSF4P23510 SNORA40.19-201ENST00000390846 128 ntBASIC2.58□□□□□ -2
TNFSF4P23510 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.58□□□□□ -2
TNFSF4P23510 MIR1283-1-201ENST00000408494 87 ntBASIC2.58□□□□□ -2
TNFSF4P23510 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.58□□□□□ -2
TNFSF4P23510 AL137792.2-201ENST00000443484 235 ntBASIC2.58□□□□□ -2
TNFSF4P23510 AC074290.1-201ENST00000448883 135 ntBASIC2.58□□□□□ -2
TNFSF4P23510 AC114982.1-201ENST00000469402 321 ntBASIC2.58□□□□□ -2
TNFSF4P23510 AC008885.1-201ENST00000514930 301 ntBASIC2.58□□□□□ -2
TNFSF4P23510 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.58□□□□□ -2
TNFSF4P23510 CYCSP23-201ENST00000519781 313 ntBASIC2.58□□□□□ -2
TNFSF4P23510 PRELID2P1-201ENST00000552837 301 ntBASIC2.58□□□□□ -2
TNFSF4P23510 MIR4753-201ENST00000585119 83 ntBASIC2.58□□□□□ -2
TNFSF4P23510 AL031274.2-201ENST00000599419 203 ntBASIC2.58□□□□□ -2
TNFSF4P23510 uc_338.22-201ENST00000622722 187 ntBASIC2.58□□□□□ -2
TNFSF4P23510 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.58□□□□□ -2
TNFSF4P23510 AC093831.2-201ENST00000624393 3427 ntBASIC2.58□□□□□ -2
TNFSF4P23510 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.57□□□□□ -2
TNFSF4P23510 RNU6-879P-201ENST00000364328 108 ntBASIC2.57□□□□□ -2
TNFSF4P23510 Y_RNA.445-201ENST00000384168 102 ntBASIC2.57□□□□□ -2
TNFSF4P23510 SNORD14D-201ENST00000384390 87 ntBASIC2.57□□□□□ -2
TNFSF4P23510 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
TNFSF4P23510 MIR586-201ENST00000385035 97 ntBASIC2.57□□□□□ -2
TNFSF4P23510 MIR628-201ENST00000385229 95 ntBASIC2.57□□□□□ -2
TNFSF4P23510 RNA5SP270-201ENST00000411361 118 ntBASIC2.57□□□□□ -2
TNFSF4P23510 AC123900.1-201ENST00000420390 96 ntBASIC2.57□□□□□ -2
TNFSF4P23510 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.57□□□□□ -2
TNFSF4P23510 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.57□□□□□ -2
TNFSF4P23510 AC007395.1-201ENST00000451333 677 ntBASIC2.57□□□□□ -2
TNFSF4P23510 UQCRHP3-201ENST00000451503 251 ntBASIC2.57□□□□□ -2
TNFSF4P23510 Y_RNA.683-201ENST00000516508 93 ntBASIC2.57□□□□□ -2
TNFSF4P23510 AC022868.1-201ENST00000517767 391 ntBASIC2.57□□□□□ -2
TNFSF4P23510 AC022080.3-201ENST00000544433 482 ntBASIC2.57□□□□□ -2
TNFSF4P23510 RRN3P3-201ENST00000549207 578 ntBASIC2.57□□□□□ -2
TNFSF4P23510 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.57□□□□□ -2
TNFSF4P23510 AC233702.2-202ENST00000562547 291 ntBASIC2.57□□□□□ -2
TNFSF4P23510 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.57□□□□□ -2
TNFSF4P23510 AC008873.1-201ENST00000625051 138 ntBASIC2.57□□□□□ -2
TNFSF4P23510 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TNFSF4P23510 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.57□□□□□ -2
TNFSF4P23510 AC108206.1-201ENST00000570186 4159 ntBASIC2.57□□□□□ -2
TNFSF4P23510 Y_RNA.39-201ENST00000362620 98 ntBASIC2.56□□□□□ -2
TNFSF4P23510 Y_RNA.128-201ENST00000363391 112 ntBASIC2.56□□□□□ -2
TNFSF4P23510 Y_RNA.132-201ENST00000363421 102 ntBASIC2.56□□□□□ -2
TNFSF4P23510 RNU4-76P-201ENST00000364509 141 ntBASIC2.56□□□□□ -2
TNFSF4P23510 MIR524-201ENST00000385242 87 ntBASIC2.56□□□□□ -2
TNFSF4P23510 SNORA48.5-201ENST00000391143 135 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AL356057.3-201ENST00000402607 340 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.56□□□□□ -2
TNFSF4P23510 MTCO2P12-201ENST00000427426 682 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.56□□□□□ -2
TNFSF4P23510 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.56□□□□□ -2
TNFSF4P23510 RN7SL75P-201ENST00000461926 281 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC091179.3-201ENST00000474761 144 ntBASIC2.56□□□□□ -2
TNFSF4P23510 RN7SL633P-201ENST00000488974 297 ntBASIC2.56□□□□□ -2
TNFSF4P23510 SNORA74D-201ENST00000516404 141 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.56□□□□□ -2
TNFSF4P23510 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.56□□□□□ -2
TNFSF4P23510 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC125232.2-201ENST00000592457 143 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC092447.9-201ENST00000603395 144 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC025754.2-201ENST00000606491 432 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC069234.5-201ENST00000611056 416 ntBASIC2.56□□□□□ -2
TNFSF4P23510 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.56□□□□□ -2
TNFSF4P23510 U2.1-201ENST00000618978 145 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC134503.1-201ENST00000633048 54 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AC068205.3-201ENST00000636385 468 ntBASIC2.56□□□□□ -2
TNFSF4P23510 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.56□□□□□ -2
TNFSF4P23510 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TNFSF4P23510 RNU6-545P-201ENST00000362681 104 ntBASIC2.55□□□□□ -2
TNFSF4P23510 Y_RNA.813-201ENST00000364639 102 ntBASIC2.55□□□□□ -2
TNFSF4P23510 SNORA9.2-201ENST00000365361 133 ntBASIC2.55□□□□□ -2
TNFSF4P23510 SNORA9-201ENST00000384215 133 ntBASIC2.55□□□□□ -2
TNFSF4P23510 Y_RNA.496-201ENST00000384444 101 ntBASIC2.55□□□□□ -2
TNFSF4P23510 SNORA46-201ENST00000384762 135 ntBASIC2.55□□□□□ -2
TNFSF4P23510 AL033519.2-201ENST00000403958 392 ntBASIC2.55□□□□□ -2
TNFSF4P23510 MIR1262-201ENST00000408276 93 ntBASIC2.55□□□□□ -2
TNFSF4P23510 RNU6-1001P-201ENST00000411265 100 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms